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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_172.1_07093
Locus scaffold172.1 : 156102 ... 166985 : -
To GenomeBrowser scaffold172.1:156102..166985
Genes list of scaffold scaffold172.1
Synonym pfu_aug1.0_184.1_36357

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_172.1_07093.t1 8 1 LRR_9 127 189 1.8e-13 50.4 0.064 110.0 2.3
pfu_aug2.0_172.1_07093.t1 12 1 LRR_8 133 186 0.0 355.0 1.1e-11 1.8e-08 34.0
pfu_aug2.0_172.1_07093.t1 16 1 LRR_4 133 162 0.0 162.1 0.19 310.0 1.1
pfu_aug2.0_172.1_07093.t1 5 1 LRR_5 136 248 0.0 172.6 4.3e-13 7.0e-10 38.7
pfu_aug2.0_172.1_07093.t1 21 1 LRR_7 150 163 1.5e-10 39.5 0.65 1100.0 0.7
pfu_aug2.0_172.1_07093.t1 16 2 LRR_4 151 191 0.0 162.1 3.7e-05 0.06 12.9
pfu_aug2.0_172.1_07093.t1 21 1 LRR_1 152 173 1.2e-31 103.8 0.22 360.0 1.8
pfu_aug2.0_172.1_07093.t1 21 1 LRR_6 152 163 3.2e-09 35.9 2.4 4000.0 -1.5
pfu_aug2.0_172.1_07093.t1 21 2 LRR_6 173 187 3.2e-09 35.9 0.053 87.0 3.6
pfu_aug2.0_172.1_07093.t1 16 3 LRR_4 174 210 0.0 162.1 1.5e-06 0.0025 17.4
pfu_aug2.0_172.1_07093.t1 12 2 LRR_8 175 234 0.0 355.0 5.1e-16 8.4e-13 47.8
pfu_aug2.0_172.1_07093.t1 21 2 LRR_1 175 197 1.2e-31 103.8 0.00063 1.0 9.6
pfu_aug2.0_172.1_07093.t1 21 2 LRR_7 175 189 1.5e-10 39.5 0.25 420.0 1.9
pfu_aug2.0_172.1_07093.t1 21 3 LRR_6 198 210 3.2e-09 35.9 0.12 200.0 2.5
pfu_aug2.0_172.1_07093.t1 21 3 LRR_7 199 214 1.5e-10 39.5 0.031 51.0 4.7
pfu_aug2.0_172.1_07093.t1 16 4 LRR_4 200 235 0.0 162.1 6.2e-09 1.0e-05 25.0
pfu_aug2.0_172.1_07093.t1 21 3 LRR_1 200 219 1.2e-31 103.8 0.0061 10.0 6.6
pfu_aug2.0_172.1_07093.t1 8 2 LRR_9 202 263 1.8e-13 50.4 4.1e-05 0.067 12.7
pfu_aug2.0_172.1_07093.t1 5 2 LRR_5 215 341 0.0 172.6 9.2e-14 1.5e-10 40.8
pfu_aug2.0_172.1_07093.t1 21 4 LRR_6 221 234 3.2e-09 35.9 0.0039 6.4 7.1
pfu_aug2.0_172.1_07093.t1 12 3 LRR_8 222 282 0.0 355.0 3.5e-17 5.7e-14 51.6
pfu_aug2.0_172.1_07093.t1 16 5 LRR_4 222 261 0.0 162.1 5.0e-11 8.3e-08 31.6
pfu_aug2.0_172.1_07093.t1 21 4 LRR_7 222 235 1.5e-10 39.5 0.01 17.0 6.1
pfu_aug2.0_172.1_07093.t1 21 4 LRR_1 223 245 1.2e-31 103.8 0.00015 0.25 11.5
pfu_aug2.0_172.1_07093.t1 8 3 LRR_9 225 323 1.8e-13 50.4 7.2e-06 0.012 15.1
pfu_aug2.0_172.1_07093.t1 21 5 LRR_6 245 260 3.2e-09 35.9 0.00017 0.29 11.3
pfu_aug2.0_172.1_07093.t1 16 6 LRR_4 247 287 0.0 162.1 3.2e-08 5.3e-05 22.7
pfu_aug2.0_172.1_07093.t1 21 5 LRR_1 247 267 1.2e-31 103.8 1.6e-05 0.027 14.4
pfu_aug2.0_172.1_07093.t1 21 5 LRR_7 247 261 1.5e-10 39.5 0.0035 5.8 7.5
pfu_aug2.0_172.1_07093.t1 16 7 LRR_4 270 306 0.0 162.1 3.4e-07 0.00055 19.4
pfu_aug2.0_172.1_07093.t1 21 6 LRR_6 270 282 3.2e-09 35.9 2.6 4300.0 -1.6
pfu_aug2.0_172.1_07093.t1 12 4 LRR_8 271 330 0.0 355.0 3.1e-20 5.1e-17 61.3
pfu_aug2.0_172.1_07093.t1 21 6 LRR_1 272 282 1.2e-31 103.8 0.21 340.0 1.9
pfu_aug2.0_172.1_07093.t1 21 6 LRR_7 272 282 1.5e-10 39.5 0.43 710.0 1.2
pfu_aug2.0_172.1_07093.t1 8 4 LRR_9 274 357 1.8e-13 50.4 3.5e-05 0.058 12.9
pfu_aug2.0_172.1_07093.t1 5 3 LRR_5 284 406 0.0 172.6 8.0e-15 1.3e-11 44.2
pfu_aug2.0_172.1_07093.t1 21 7 LRR_6 293 306 3.2e-09 35.9 0.028 46.0 4.5
pfu_aug2.0_172.1_07093.t1 21 7 LRR_7 294 306 1.5e-10 39.5 0.3 500.0 1.7
pfu_aug2.0_172.1_07093.t1 16 8 LRR_4 295 332 0.0 162.1 2.9e-06 0.0048 16.4
pfu_aug2.0_172.1_07093.t1 21 7 LRR_1 295 317 1.2e-31 103.8 0.0027 4.4 7.7
pfu_aug2.0_172.1_07093.t1 12 5 LRR_8 319 378 0.0 355.0 9.4e-15 1.5e-11 43.8
pfu_aug2.0_172.1_07093.t1 21 8 LRR_1 319 341 1.2e-31 103.8 0.0011 1.8 8.8
pfu_aug2.0_172.1_07093.t1 21 8 LRR_7 319 331 1.5e-10 39.5 0.4 660.0 1.3
pfu_aug2.0_172.1_07093.t1 21 8 LRR_6 319 330 3.2e-09 35.9 0.17 270.0 2.1
pfu_aug2.0_172.1_07093.t1 5 4 LRR_5 332 461 0.0 172.6 6.3e-12 1.0e-08 34.9
pfu_aug2.0_172.1_07093.t1 16 9 LRR_4 343 379 0.0 162.1 8.6e-08 0.00014 21.3
pfu_aug2.0_172.1_07093.t1 21 9 LRR_1 344 362 1.2e-31 103.8 0.00092 1.5 9.1
pfu_aug2.0_172.1_07093.t1 21 9 LRR_7 344 358 1.5e-10 39.5 0.1 160.0 3.1
pfu_aug2.0_172.1_07093.t1 21 9 LRR_6 344 354 3.2e-09 35.9 5.3 8700.0 -2.6
pfu_aug2.0_172.1_07093.t1 8 5 LRR_9 347 440 1.8e-13 50.4 0.0013 2.1 7.8
pfu_aug2.0_172.1_07093.t1 12 6 LRR_8 367 426 0.0 355.0 2.0e-16 3.3e-13 49.1
pfu_aug2.0_172.1_07093.t1 21 10 LRR_1 367 387 1.2e-31 103.8 0.0046 7.6 6.9
pfu_aug2.0_172.1_07093.t1 21 10 LRR_7 367 379 1.5e-10 39.5 0.34 550.0 1.6
pfu_aug2.0_172.1_07093.t1 21 10 LRR_6 367 378 3.2e-09 35.9 1.5 2500.0 -0.9
pfu_aug2.0_172.1_07093.t1 16 10 LRR_4 391 430 0.0 162.1 6.0e-08 9.8e-05 21.8
pfu_aug2.0_172.1_07093.t1 21 11 LRR_1 391 411 1.2e-31 103.8 0.00099 1.6 9.0
pfu_aug2.0_172.1_07093.t1 21 11 LRR_7 391 403 1.5e-10 39.5 0.26 420.0 1.9
pfu_aug2.0_172.1_07093.t1 21 11 LRR_6 391 410 3.2e-09 35.9 0.012 20.0 5.6
pfu_aug2.0_172.1_07093.t1 21 12 LRR_6 414 427 3.2e-09 35.9 0.049 80.0 3.7
pfu_aug2.0_172.1_07093.t1 16 11 LRR_4 416 454 0.0 162.1 1.0e-07 0.00017 21.1
pfu_aug2.0_172.1_07093.t1 21 12 LRR_1 416 431 1.2e-31 103.8 0.0028 4.6 7.6
pfu_aug2.0_172.1_07093.t1 21 12 LRR_7 416 428 1.5e-10 39.5 0.012 20.0 5.9
pfu_aug2.0_172.1_07093.t1 12 7 LRR_8 423 460 0.0 355.0 7.6e-06 0.012 15.2
pfu_aug2.0_172.1_07093.t1 21 13 LRR_1 440 459 1.2e-31 103.8 0.016 26.0 5.3
pfu_aug2.0_172.1_07093.t1 21 13 LRR_7 440 452 1.5e-10 39.5 9.0 15000.0 -2.8
pfu_aug2.0_172.1_07093.t1 21 13 LRR_6 440 452 3.2e-09 35.9 1.2 1900.0 -0.5
pfu_aug2.0_172.1_07093.t1 8 6 LRR_9 466 531 1.8e-13 50.4 0.00025 0.4 10.2
pfu_aug2.0_172.1_07093.t1 21 14 LRR_6 467 487 3.2e-09 35.9 0.36 600.0 1.0
pfu_aug2.0_172.1_07093.t1 12 8 LRR_8 468 527 0.0 355.0 1.9e-16 3.1e-13 49.2
pfu_aug2.0_172.1_07093.t1 21 14 LRR_1 470 490 1.2e-31 103.8 0.017 27.0 5.3
pfu_aug2.0_172.1_07093.t1 16 12 LRR_4 471 506 0.0 162.1 1.5e-08 2.5e-05 23.7
pfu_aug2.0_172.1_07093.t1 21 14 LRR_7 471 482 1.5e-10 39.5 1.4 2400.0 -0.3
pfu_aug2.0_172.1_07093.t1 5 5 LRR_5 472 585 0.0 172.6 2.8e-14 4.5e-11 42.5
pfu_aug2.0_172.1_07093.t1 21 15 LRR_6 490 504 3.2e-09 35.9 0.0082 14.0 6.1
pfu_aug2.0_172.1_07093.t1 21 15 LRR_7 491 504 1.5e-10 39.5 0.0099 16.0 6.2
pfu_aug2.0_172.1_07093.t1 21 15 LRR_1 492 512 1.2e-31 103.8 0.022 36.0 4.9
pfu_aug2.0_172.1_07093.t1 21 16 LRR_7 515 530 1.5e-10 39.5 0.014 22.0 5.8
pfu_aug2.0_172.1_07093.t1 12 9 LRR_8 516 575 0.0 355.0 1.8e-18 2.9e-15 55.7
pfu_aug2.0_172.1_07093.t1 16 13 LRR_4 516 552 0.0 162.1 2.8e-08 4.6e-05 22.9
pfu_aug2.0_172.1_07093.t1 21 16 LRR_1 516 538 1.2e-31 103.8 0.0015 2.5 8.4
pfu_aug2.0_172.1_07093.t1 21 16 LRR_6 516 528 3.2e-09 35.9 0.03 49.0 4.4
pfu_aug2.0_172.1_07093.t1 8 7 LRR_9 539 622 1.8e-13 50.4 7.6e-06 0.013 15.1
pfu_aug2.0_172.1_07093.t1 21 17 LRR_7 539 553 1.5e-10 39.5 0.027 44.0 4.9
pfu_aug2.0_172.1_07093.t1 12 10 LRR_8 541 599 0.0 355.0 1.9e-18 3.2e-15 55.6
pfu_aug2.0_172.1_07093.t1 21 17 LRR_1 541 562 1.2e-31 103.8 0.00069 1.1 9.4
pfu_aug2.0_172.1_07093.t1 21 17 LRR_6 541 558 3.2e-09 35.9 0.0096 16.0 5.9
pfu_aug2.0_172.1_07093.t1 12 11 LRR_8 564 621 0.0 355.0 1.5e-11 2.5e-08 33.5
pfu_aug2.0_172.1_07093.t1 16 14 LRR_4 564 602 0.0 162.1 7.7e-09 1.3e-05 24.7
pfu_aug2.0_172.1_07093.t1 21 18 LRR_1 564 584 1.2e-31 103.8 0.0014 2.3 8.5
pfu_aug2.0_172.1_07093.t1 21 18 LRR_7 564 578 1.5e-10 39.5 0.02 33.0 5.3
pfu_aug2.0_172.1_07093.t1 21 18 LRR_6 564 578 3.2e-09 35.9 0.00067 1.1 9.5
pfu_aug2.0_172.1_07093.t1 21 19 LRR_6 586 599 3.2e-09 35.9 0.054 88.0 3.6
pfu_aug2.0_172.1_07093.t1 16 15 LRR_4 588 622 0.0 162.1 6.1e-06 0.01 15.4
pfu_aug2.0_172.1_07093.t1 21 19 LRR_1 588 610 1.2e-31 103.8 0.017 28.0 5.2
pfu_aug2.0_172.1_07093.t1 21 19 LRR_7 588 599 1.5e-10 39.5 0.013 22.0 5.8
pfu_aug2.0_172.1_07093.t1 12 12 LRR_8 611 670 0.0 355.0 1.3e-05 0.021 14.5
pfu_aug2.0_172.1_07093.t1 21 20 LRR_7 611 622 1.5e-10 39.5 0.84 1400.0 0.4
pfu_aug2.0_172.1_07093.t1 21 20 LRR_6 611 622 3.2e-09 35.9 0.032 52.0 4.3
pfu_aug2.0_172.1_07093.t1 21 20 LRR_1 612 622 1.2e-31 103.8 0.46 760.0 0.9
pfu_aug2.0_172.1_07093.t1 21 21 LRR_1 635 652 1.2e-31 103.8 0.0038 6.3 7.2
pfu_aug2.0_172.1_07093.t1 8 8 LRR_9 635 677 1.8e-13 50.4 0.024 40.0 3.7
pfu_aug2.0_172.1_07093.t1 21 21 LRR_7 635 648 1.5e-10 39.5 0.0071 12.0 6.6
pfu_aug2.0_172.1_07093.t1 16 16 LRR_4 636 653 0.0 162.1 0.0046 7.6 6.2
pfu_aug2.0_172.1_07093.t1 21 21 LRR_6 636 650 3.2e-09 35.9 0.039 65.0 4.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_172.1_07093.t1 gi|260803667|ref|XP_002596711.1| hypothetical protein BRAFLDRAFT_78389 [Branchiostoma floridae] 0.0
pfu_aug2.0_172.1_07093.t1 gi|390341017|ref|XP_003725355.1| PREDICTED: toll-like receptor 2 [Strongylocentrotus purpuratus] 0.0
pfu_aug2.0_172.1_07093.t1 gi|390341015|ref|XP_003725354.1| 0.0
pfu_aug2.0_172.1_07093.t1 gi|291223841|ref|XP_002731920.1| PREDICTED: insulin-like growth factor-binding protein complex acid labile subunit-like [Saccoglossus kowalevskii] 0.0
pfu_aug2.0_172.1_07093.t1 gi|617401483|ref|XP_007552507.1| PREDICTED: leucine-rich repeat-containing protein 15-like [Poecilia formosa] 0.0

Transcript
Transcript IDpfu_aug2.0_172.1_07093.t1
Definition-
>pfu_aug2.0_172.1_07093.t1
atgaagaacattctattatactgtggtttaacattcattctgttacctcaaactatggatgcatttggttcgtacccccg
ccggtacagccgtgacactgagggggcaaattgtccccaccaatgccgctgtatgaggttactacagagagggacacggg
aattatttgatgatggaaagagaacacatcagtggactgccaagaattatgagagggaccctgcagtattaagtgacagt
cctagcccccacgggaggagtatgatctgtcagggacttaggcggctcccatacccaataccctcggatataatgaaatt
gaccatatatggcgacggaagcggaagtgcaccccgaggagacgatcagtctataggtagataccgcgctgcactcatct
ccgatacccagatccggtacatcgacaaggaatcttttaagagtgtcccagggttaacagaactgaccatgtttggaaac
aacattggtatcctctatccgtatattttctatcatctcaagtccctcgaaattttgaatttaccaaacaacaacatacg
tcatttgtctgctgcggtattcagtggtctgtcaggtctcagagaactccgtctgtctgataatctaatccggttcctac
caagcacaatgttcaactttttaccgaatctgagaatattgaatcttaatggcaacaagataagattcatccaaagagat
ctgtttcaaaaattatcaaaacttgaaattttggacttgtcgaggaacaacattacggatttatacgataccgtatttga
ctctaacaccgagcttcgagagctattgctaaatggaaacagactttggaaaattcgtccaagatggttccgtaacctcc
agaatctgagaagtttttctttgagtggaaacacaatcagagtagtagagtcgggcgccttctccaatcttgtgaactta
caggaacttttgttatcagccaatcatattgtgcgaatacaagacggcgcatttgaacatttacgcgaattgcggatact
tgatttagcgacaaacgacattgaagagattccaccttcgctatttttgtatcttgattcgctcgaagaactatatcttg
gaacaaataatctgaagatcatccgaaatggcacatttagtgcagcaagaagtctcatcagattagatctttcgagaaat
acaatttcttacatcgacccgggagctttgcgtccacttaaaatgctccagtatttggacttggcacacaataagttcac
caccatgagaagtttcatgatattcggcttggacgaattgaaggagatcaatttagaacataatttcattaacactatag
aaacggatacgttcaagacttcctctgttagttatctgtccaaagtgtccgtccttaatctgaagagcaacaacttacgt
aaattagatgctgacagtttacaaggacttccgcaccttaaatcacttgaattaggaaataataaattgaaacgagtaca
cagcttagcattcgccaatgtcggaaatcttaggacacttgaattgcaaaacaacaaaatcaaaagattaagtaacggga
tttttacaagcttacatagacttttggaacttgatttgtcttccaacaagatacgtacggtagggtccgatgcattccaa
ggacttgacaatttggaggatttagatatgagttcaaatggcatccatgacattgatgaaaacagcttccggccattgag
aagtttgacaaatcttaatcttcgcggaaatagactgttgagttttaattttactcttgttaccaagtttcctcagttgt
cttcacttgacctcagcgaaaattacatgttttggatagacattcaggaaggtacgaaactacgtctgaaagaactaaac
cttaacagtaaccaccttaaaacggtcggatctgacttaacgcaaataatgtccagctcatcctatgtttcattcaccgg
aaacccactggcatgtgactgccatctaagatggcttctggatccgggactgtcgagtaaaacaagaatagaaaatatgg
atgacgtcgtctgcaagacgccaaataagttacacggaagaagggtgagtcacctgatggaggaagatctgatatgcgat
acacaagagctacaaaaagatcagccttctatgatatgcgatgaaatgacgtttacacagaaacaacactatgattctag
gtttggaaacaaagccgcagtttctcgacatgtgacgatatttacagaaaacaacgagcctcttgcaaatggagttatgc
tgaatgacgattgggccttaacgattggcagtcatttcaaatcttcccgcacaaatagattgaaagtcaggattggtcgg
agtaaaaaaccacgtgatatcgtcagcatcattcgtcatccattggttgccatgaatatgcagcaatataacgtagccgt
ggtgaaattggcatccaggaagaaaggaaaatcaacaactatcccatgttttctgacttataaacaatttgcctctttat
ccaaaattgtaccacgagtgatggttacaacacgaataagtggaaagaaattgttctcaaaactcaaaccgaaaaagggt
cgattaagcactgggtgcaaaaataaagattttgtatgtgcaaaaatcaagaattccaagaaaagtgataaacctttaat
gatgataaatggttcgccaatgtacctaggcaaagcaagtcattctcgcttggctgggataggcatagacattggcatgc
ctagtacgtatgaatataacttcattcctatctggtctgtatcagactgggtatccaccgtcatgcaggagtttgacaac
aagtgtaatgtagacaaatatggaaatcctaattgctcaggacttaatctgcccacactgaacgatatgatccagaaatt
acagcctatggagcaacattaa

Protein
Protein IDpfu_aug2.0_172.1_07093.t1
Definition-
>pfu_aug2.0_172.1_07093.t1
MKNILLYCGLTFILLPQTMDAFGSYPRRYSRDTEGANCPHQCRCMRLLQRGTRELFDDGKRTHQWTAKNYERDPAVLSDS
PSPHGRSMICQGLRRLPYPIPSDIMKLTIYGDGSGSAPRGDDQSIGRYRAALISDTQIRYIDKESFKSVPGLTELTMFGN
NIGILYPYIFYHLKSLEILNLPNNNIRHLSAAVFSGLSGLRELRLSDNLIRFLPSTMFNFLPNLRILNLNGNKIRFIQRD
LFQKLSKLEILDLSRNNITDLYDTVFDSNTELRELLLNGNRLWKIRPRWFRNLQNLRSFSLSGNTIRVVESGAFSNLVNL
QELLLSANHIVRIQDGAFEHLRELRILDLATNDIEEIPPSLFLYLDSLEELYLGTNNLKIIRNGTFSAARSLIRLDLSRN
TISYIDPGALRPLKMLQYLDLAHNKFTTMRSFMIFGLDELKEINLEHNFINTIETDTFKTSSVSYLSKVSVLNLKSNNLR
KLDADSLQGLPHLKSLELGNNKLKRVHSLAFANVGNLRTLELQNNKIKRLSNGIFTSLHRLLELDLSSNKIRTVGSDAFQ
GLDNLEDLDMSSNGIHDIDENSFRPLRSLTNLNLRGNRLLSFNFTLVTKFPQLSSLDLSENYMFWIDIQEGTKLRLKELN
LNSNHLKTVGSDLTQIMSSSSYVSFTGNPLACDCHLRWLLDPGLSSKTRIENMDDVVCKTPNKLHGRRVSHLMEEDLICD
TQELQKDQPSMICDEMTFTQKQHYDSRFGNKAAVSRHVTIFTENNEPLANGVMLNDDWALTIGSHFKSSRTNRLKVRIGR
SKKPRDIVSIIRHPLVAMNMQQYNVAVVKLASRKKGKSTTIPCFLTYKQFASLSKIVPRVMVTTRISGKKLFSKLKPKKG
RLSTGCKNKDFVCAKIKNSKKSDKPLMMINGSPMYLGKASHSRLAGIGIDIGMPSTYEYNFIPIWSVSDWVSTVMQEFDN
KCNVDKYGNPNCSGLNLPTLNDMIQKLQPMEQH

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Okinawa Institute of Science and Technology
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