Gene
| Gene Model ID | pfu_aug2.0_172.1_07094 |
|---|---|
| Locus | scaffold172.1 : 198747 ... 202975 : - |
| To GenomeBrowser | scaffold172.1:198747..202975 |
| Genes list of scaffold | scaffold172.1 |
| Synonym | pfu_aug1.0_184.1_36359 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_172.1_07094.t1 | 2 | 1 | RVT_1 | 460 | 495 | 5.2e-06 | 25.9 | 0.19 | 460.0 | -0.1 |
| pfu_aug2.0_172.1_07094.t1 | 2 | 2 | RVT_1 | 516 | 566 | 5.2e-06 | 25.9 | 2.4e-08 | 5.9e-05 | 22.5 |
| pfu_aug2.0_172.1_07094.t1 | 1 | 1 | rve | 885 | 992 | 5.7e-21 | 74.8 | 8.8e-24 | 2.2e-20 | 72.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_172.1_07094.t1 | gi|524898861|ref|XP_005105874.1| | PREDICTED: uncharacterized protein K02A2.6-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_172.1_07094.t1 | gi|524893723|ref|XP_005103370.1| | PREDICTED: uncharacterized protein K02A2.6-like [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_172.1_07094.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_172.1_07094.t1 atgcccaagttcaacccacccgaagcattcgacttcagtaaaccctctgactggccagagtggaaacaaagatttctcag atataggacagcttcaaaacttcacaaagaagatgaagatatacaaataagctctctaatatatgcaatgggtttgcaag cagaacatgtattcaaatcgttcgtattttctgtcgacgaagaccaaactaagtatgaggatgtcatgaaaaagtttgac tcttacttcgtaccgaagcgtaatgttatccatgaaagagctaaatttcacatgcgcacacaaggccaaggtgaatctgt cgaaacatttattagatctttacacgagttagcagaacactgtgaattcgacaataaatcagaggtcattcgagaccgat tggtaataggaattcgtgacaaagaagtatccgagaaactgcaacttcaggcagatttaactcttgacaaagcttgcgaa atggcaaggaattctgagcttgttaagtcacaaattaaagacttgcaatcgcacaacttagatgctgtaaaaacgcacaa ccgtacacaaggagcaaatgaacgtttcagacaaggtcaaggtcgtggtcgaggaaataaaccgcaacagcgtaaacccg cattttatccggtatgtgatcgttgcaatcgcaaacaccctgcaaaccaatgtccggcattcggccaacaatgtcgtaaa tgcaaaaacttgcatcattttgctatatgttgcaaaacgaaaatgaaacaaaaggcatgcaatgaaattcaacaacaaaa cgatgatttcgatgacgaaacatattttctaggctcgatagaaaataatagcgataccgaaccttggtacgtcaatttga aggtcaacaaccgcatactgtcgtttaaaattgatacaggtgctgatgttagcgttataagcgaagcaacatataaacac ttgcgtccgaaaccaaacctagtacctatcagaagcacattgagtagtccgggaggagtactacattgtttaggtaaatt tgagagtgtcacaaggcacaaaggaaagacgtattcactgccattatatgtgatttcaggaggtcattcagacaatttgt tatcttgcactgctgcgtgtagcatgggtctcatagttatgattgaggaggtaaagagctttggtcgcatgaaaggcgaa cctgtgaaaattgtgttacgcgacgacgcaaaaccctattgtctaaacaccgcacgtagaataccttttccaatcatgcc gaaagtaaaatccgaactgaaccgtttggaacaagatggcattatagtcaaggtcacgagacctaccgattggtgcgctc caattgtacccgtaatcaagaaaaatggagacattcgtatatgtgtcgacctcaagcatctaaatcaggccgtaaaacga gaaacgtatatgttacctaatcttgacgacattgcaccaaaactacgtggttcaacaaggcgtatgaccgacatattgaa gggattagatggtgtcgaaaccataatcgatgacgttcttatatatggccgcaatatgactgagcacgacgaacgcttga aactcgttctcgaacgcattcaaaatgcaggaatcaagctgaacaatgataaatgcgaatatcgcaaggaacgtatcgaa tatttcggacatgtaatatgcaaggagggaatattaccgagtccccaacgattacaagctatacaggagttaccggctcc taccgacgtatctgaattgcgccgcttgattggcatgataatgtacttaggaagattcattcccgacttatcatcgatga tacatccgctcaccgacctactcaaatctgatacagcatggacatgggataaaccccaaatcgaagcatttgacaaggtg aaattagcgttaatccaagctcctgcactagcattctatgatccgtcgaaacctatcacaataagtgcagatgctagtag ctatggtctcggagcagctttatatcaaacattcgacaacgagatgaagccaattgcattcgcatcgagaactctcacgg aaacagagagaaagtacgctcaaatcgaaaaagaatgcttagccgcagtatgggcctgcgaaaagtttgatcgttacatc acaggcattgtatcattccgacttattacagaccataagccattggttccgttgataaacacgcaagacttggatcgaac acccttgagatgtcaacgtcttttaatgagattacgccgctataacggtattgctgaacatgttccgggaaagcaactcg tagtacccgacacgttatcacgtagccctttgaaaagcactcacaacagtaccgagcaagacgttaccgcatatgtgaac ggtatttcgcagaaaggaatcgcacccgacacaaagttacaggaaatttgcgatatgacagaaagcgatccaattttaca agaggttatccgttttacacgtcaaggcctacacaaatgcagagaacgcgctaaaatcagtgtatggtggcccggcgtct cgaaagacatcgagaagcttattagcaactgtgaattttgcaatactcatcgtccgactcagagaaaagaaccacttatc tctacatcgatgcctgatcgtccatggcaacgaataggaaccgatctgtgtgaacacgatggaaagcagtatctcatcgt aatggattatttctcacgttacatcgaaatagtgcatctaaattccctaacaagcgcaaacgtcattggaaaactcaaaa acatgtttgcgagatggggaattccgactgaagtagtaagtgacaacggtggacaattcgcatcgaccagttttcgagaa ttcgcatcaaaatacggcttcaggcatgtaacatcgagtccgcattatccgcatgctaacggacaagcggaaagtggcgt taaaattgccaagcgcattctaaagcaacctgacatattcttggcattaatggcgtacaggagtacaccagtacatgcaa ccggaagtagccccgctgaacttatcatgggaaggaagatgagaaccatcattcctgtacatccggataatctagaaccg gagtggccgaatctagatctcgcacgcaagaaagatgctcatgcgaaactcaatatgcgtaccaactttaacctatctca tggagcacgcaatcttacatccttatccgtaggcgataaagtacgactcaaaaccgacaaggaaaaacattggaacgata aaggagttgtagtatccgccgattatcgtaaccgatcgtatgaaatccagactaatcatggaatattccgacgaaatcga cgtcatattttgcacactggtgatgaaccatgggaatcattaccaactcaggaacatgttatcattccgcccgtctctga accaccagagaagtgtttgaatcgaaatattgctccggattcaaccacaccaaatgtcaagcataaccatagtatcgacg tgcctacaaacaataacagttctcaagacacacgcgatatcccgagtcaaggatacaaaacacgtagtggacgattggtc acaaaaggcatagtgtaa |
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Protein
| Protein ID | pfu_aug2.0_172.1_07094.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_172.1_07094.t1 MPKFNPPEAFDFSKPSDWPEWKQRFLRYRTASKLHKEDEDIQISSLIYAMGLQAEHVFKSFVFSVDEDQTKYEDVMKKFD SYFVPKRNVIHERAKFHMRTQGQGESVETFIRSLHELAEHCEFDNKSEVIRDRLVIGIRDKEVSEKLQLQADLTLDKACE MARNSELVKSQIKDLQSHNLDAVKTHNRTQGANERFRQGQGRGRGNKPQQRKPAFYPVCDRCNRKHPANQCPAFGQQCRK CKNLHHFAICCKTKMKQKACNEIQQQNDDFDDETYFLGSIENNSDTEPWYVNLKVNNRILSFKIDTGADVSVISEATYKH LRPKPNLVPIRSTLSSPGGVLHCLGKFESVTRHKGKTYSLPLYVISGGHSDNLLSCTAACSMGLIVMIEEVKSFGRMKGE PVKIVLRDDAKPYCLNTARRIPFPIMPKVKSELNRLEQDGIIVKVTRPTDWCAPIVPVIKKNGDIRICVDLKHLNQAVKR ETYMLPNLDDIAPKLRGSTRRMTDILKGLDGVETIIDDVLIYGRNMTEHDERLKLVLERIQNAGIKLNNDKCEYRKERIE YFGHVICKEGILPSPQRLQAIQELPAPTDVSELRRLIGMIMYLGRFIPDLSSMIHPLTDLLKSDTAWTWDKPQIEAFDKV KLALIQAPALAFYDPSKPITISADASSYGLGAALYQTFDNEMKPIAFASRTLTETERKYAQIEKECLAAVWACEKFDRYI TGIVSFRLITDHKPLVPLINTQDLDRTPLRCQRLLMRLRRYNGIAEHVPGKQLVVPDTLSRSPLKSTHNSTEQDVTAYVN GISQKGIAPDTKLQEICDMTESDPILQEVIRFTRQGLHKCRERAKISVWWPGVSKDIEKLISNCEFCNTHRPTQRKEPLI STSMPDRPWQRIGTDLCEHDGKQYLIVMDYFSRYIEIVHLNSLTSANVIGKLKNMFARWGIPTEVVSDNGGQFASTSFRE FASKYGFRHVTSSPHYPHANGQAESGVKIAKRILKQPDIFLALMAYRSTPVHATGSSPAELIMGRKMRTIIPVHPDNLEP EWPNLDLARKKDAHAKLNMRTNFNLSHGARNLTSLSVGDKVRLKTDKEKHWNDKGVVVSADYRNRSYEIQTNHGIFRRNR RHILHTGDEPWESLPTQEHVIIPPVSEPPEKCLNRNIAPDSTTPNVKHNHSIDVPTNNNSSQDTRDIPSQGYKTRSGRLV TKGIV |
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