Gene
| Gene Model ID | pfu_aug2.0_172.1_07097 |
|---|---|
| Locus | scaffold172.1 : 284096 ... 310627 : + |
| To GenomeBrowser | scaffold172.1:284096..310627 |
| Genes list of scaffold | scaffold172.1 |
| Synonym | pfu_aug1.0_64270.1_41807 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_172.1_07097.t1 | 2 | 1 | Lectin_C | 36 | 153 | 2.8e-10 | 40.7 | 5.7e-14 | 2.8e-10 | 40.7 |
| pfu_aug2.0_172.1_07097.t1 | 2 | 2 | Lectin_C | 315 | 354 | 2.8e-10 | 40.7 | 0.51 | 2500.0 | -0.9 |
Transcript
| Transcript ID | pfu_aug2.0_172.1_07097.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_172.1_07097.t1 atggtgtctaaacttacccttctccttggagccatttcattcatgaatggaaatgccagcgataagctgatatttgatta ctgtcgctatcagtttcatctccaacccttgaattgggaagaagcgaggaaaatatgtagaaggaataatcgaacactcg ttcaggttaatgatgacaatgagcttaaatcaatcgttagtatggcagaaaccaaggtttactcaaggatgaaagaatat ccctatctgtcaacagatatttggattggactgcgagcgtactcacctgacggttctattaggcacatctgggaaaattg cgatacgcttgaagagaactatgatatatgggagaatagtgattttagaacaatggaaggttgtgttagtgttaagtgga atgatacaaagtacatcgtacgtaactgcataaatgaatcaaggccttacatttgcgaatctacaagcttcatagatata agttcgtatgatttgagtattgcttctattcctcctattacttgtgcacagtacagttcacgtatacctatacgaggatc atcaagttacacttctatgatgaccactctacctactggatgggacaccataggcgatacttcctctttaacttctggat tgattgaatcaagtttcacatcagaaccatttgagaaccgggacgtaagttcatctcagaggataccgacccctgaacta cagtcagtatctcaaataattcaaacgtttcgagtctcaaaagatagcattggtcaatcgacaacagcaacccctttgtc atctttcttatcatcaatagccgtctcgaaagcaagcgacaaattcataaaatcaatgacatcagatgaaagcgcgacag aatttctcccaatacttacggaagaaagtagtactgatcaagtattatcaacagacatcccacaacaaaggtctacaaaa gttgcaacttcagttgagagttcttcatatatggttacattgtctcaagatagaacaggtactaatcaactatctccatc agacgtcattgcgacgagtgataattccatacagcatatgacatcagaagtgacaacactagctgagagtagtagcaagg cttcatcaatgaccacaaccttgagcagtgaccttacatcaacaatcagcacaggttgtatgtgtccttgttccatgtac aggaatacaacatacaccccagaagagcttgacagtaggataaaggagatcaaagaagtcttgacagtaaatagaaaaga gacctcagttcacaaaagatcactcatcagtgcaccagatgaacgacttagtgtaaaaagaataggatatgtgggggtat ctatcatggccgcgctatgtgtactcattgtgttaatggatatgcctagaagcatctcatgtctgaaggacttcttacga caatgcaaatga |
|
Protein
| Protein ID | pfu_aug2.0_172.1_07097.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_172.1_07097.t1 MVSKLTLLLGAISFMNGNASDKLIFDYCRYQFHLQPLNWEEARKICRRNNRTLVQVNDDNELKSIVSMAETKVYSRMKEY PYLSTDIWIGLRAYSPDGSIRHIWENCDTLEENYDIWENSDFRTMEGCVSVKWNDTKYIVRNCINESRPYICESTSFIDI SSYDLSIASIPPITCAQYSSRIPIRGSSSYTSMMTTLPTGWDTIGDTSSLTSGLIESSFTSEPFENRDVSSSQRIPTPEL QSVSQIIQTFRVSKDSIGQSTTATPLSSFLSSIAVSKASDKFIKSMTSDESATEFLPILTEESSTDQVLSTDIPQQRSTK VATSVESSSYMVTLSQDRTGTNQLSPSDVIATSDNSIQHMTSEVTTLAESSSKASSMTTTLSSDLTSTISTGCMCPCSMY RNTTYTPEELDSRIKEIKEVLTVNRKETSVHKRSLISAPDERLSVKRIGYVGVSIMAALCVLIVLMDMPRSISCLKDFLR QCK |
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