Gene
| Gene Model ID | pfu_aug2.0_172.1_07100 |
|---|---|
| Locus | scaffold172.1 : 390625 ... 403205 : - |
| To GenomeBrowser | scaffold172.1:390625..403205 |
| Genes list of scaffold | scaffold172.1 |
| Synonym | pfu_aug1.0_4074.1_59431 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_172.1_07100.t1 | 1 | 1 | TIMP | 19 | 197 | 1.1e-22 | 80.4 | 1.8e-26 | 1.3e-22 | 80.2 |
| pfu_aug2.0_172.1_07100.t1 | 1 | 1 | NTR | 28 | 111 | 2.2e-06 | 27.2 | 3.7e-10 | 2.8e-06 | 26.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_172.1_07100.t1 | gi|449680372|ref|XP_002156125.2| | PREDICTED: metalloproteinase inhibitor 3-like [Hydra vulgaris] | 1.0e-14 |
| pfu_aug2.0_172.1_07100.t1 | gi|449683625|ref|XP_004210412.1| | 6.0e-14 | |
| pfu_aug2.0_172.1_07100.t1 | gi|221128951|ref|XP_002160236.1| | PREDICTED: metalloproteinase inhibitor 3-like [Hydra vulgaris] | 3.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_172.1_07100.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_172.1_07100.t1 atggatttgttatttctttatatgatgatcgtgaatattattcatgcattaggatgcagctgtgtcaagcatcacaacca gaaacgttactgttcgtccgatatagcaataaaagcatttgttctagaagaaaaagaagtgttcaatatggaaggttacg gacatgcctcagaccttatttatgacgttgaagtcaaagaagtcttcaggaacaagttcaatgagaaattcaagatagac gtcggagaagaagtaaaggttgtaacaccaggtacagacggtgactgtaaagctgatataaagaatggtacagattacct cattgtagggtcatttagagaaggtgcaatatatgtgacgtcatgtgactggagctcaaggtttgattacgtagcagaat cacatgttgaaggtttgatgggcaaatacgattgttcttgcaaggttttcacattaagctacgcattacgagactttcca cgagatttccgcagtgtgtgtttgctcggctatcctcagagatatacggacacctgtctacgtacacatgggttctgcca gagacacacggggactggtcagtgtatgtggactgtagatcccgaggacagggactgttaa |
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Protein
| Protein ID | pfu_aug2.0_172.1_07100.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_172.1_07100.t1 MDLLFLYMMIVNIIHALGCSCVKHHNQKRYCSSDIAIKAFVLEEKEVFNMEGYGHASDLIYDVEVKEVFRNKFNEKFKID VGEEVKVVTPGTDGDCKADIKNGTDYLIVGSFREGAIYVTSCDWSSRFDYVAESHVEGLMGKYDCSCKVFTLSYALRDFP RDFRSVCLLGYPQRYTDTCLRTHGFCQRHTGTGQCMWTVDPEDRDC |
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