Gene
| Gene Model ID | pfu_aug2.0_172.1_07101 |
|---|---|
| Locus | scaffold172.1 : 403463 ... 414555 : - |
| To GenomeBrowser | scaffold172.1:403463..414555 |
| Genes list of scaffold | scaffold172.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_172.1_07101.t1 | 2 | 1 | Radical_SAM | 90 | 106 | 1.0e-05 | 25.7 | 0.18 | 680.0 | 0.3 |
| pfu_aug2.0_172.1_07101.t1 | 2 | 2 | Radical_SAM | 162 | 294 | 1.0e-05 | 25.7 | 2.2e-08 | 8.2e-05 | 22.8 |
| pfu_aug2.0_172.1_07101.t1 | 1 | 1 | DUF3641 | 314 | 449 | 0.0 | 166.1 | 0.0 | 0.0 | 164.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_172.1_07101.t1 | gi|260836791|ref|XP_002613389.1| | hypothetical protein BRAFLDRAFT_118756 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_172.1_07101.t1 | gi|585682359|ref|XP_006812229.1| | PREDICTED: uncharacterized protein LOC100373547 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_172.1_07101.t1 | gi|676379701|ref|XP_009033129.1| | selenoprotein, partial [Aureococcus anophagefferens] | 0.0 |
| pfu_aug2.0_172.1_07101.t1 | gi|551635248|ref|XP_005820459.1| | hypothetical protein GUITHDRAFT_160284 [Guillardia theta CCMP2712] | 0.0 |
| pfu_aug2.0_172.1_07101.t1 | gi|159490306|ref|XP_001703120.1| | Fe-S oxidoreductase [Chlamydomonas reinhardtii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_172.1_07101.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_172.1_07101.t1 atgagcaaaatcgtttttaataatcaaatcaggataaatgcgagggtgctgcatcggtggtacacaactggacatggacc ggaattgggaacagaaaaaataaaaccggatctaccggattacaacacatcgatagatatccatgaacacaagttacagc ggccgacaaagccccctcccatgccaaaatgggatggactgaaaaatctatcggagagaacgcagggttctctcattccg gagacgctgaaggaaatggaaaaagatggcgaattcaaagaaacattgaggaagttgaaagagcatggtcagaagaagct cacgcgagaggagagaaagaaaagacaacgagcacttgacagcttaggagtgcctgacttcttggccttttggatcgatc ggaagaaattacataacatgcaagacgaagagacagttttaagaaaaaacaccatagagatagttcaagctaacattggc atctactgtaatcaggcgtgtaaccactgtcatgtagaatcgtcacccaaacgttccgagatgatggacaggagcgtagc cgagaaaatactgaatatcctggcaaagagtccttcagtgaacattctggacatcacaggtggagcccctgagctttgca cagaattcagacgacttgcgaaaggtgggcgtgaccttggaaaggaagtcattgacagatgtaacttgaccagccttctc gaaccaggacaagaagatacccctgagttcttggctgagaacaaaattcacatcgtagcctcgctgccttgttatacacc gaagaatgtcaacttacaaaggggatccaaagtatttgagagaagtattcacgcccttcaaatcttaaataatctggggt acggaaaatctgaccccgatctccaacttgatctggtttataaccccctaggagcctacttacccccaccacaaggtcca ctggaggaaaaatacagggaagagatgttgaacgtatttggtattgaattcaacaagctttacaccatgacaaacatgcc gatcaaaagattcacagattttctatacagaaggaatgagctacaggattacatggaattgctagtaaggaactacaaca ttaatacagtccctgagttaatgtgccgaaacttacttagtgtcagctggaatggacgtctttatgactgtgacttcaat caacaactagaaatgggaattatggggaccgacgacacagaaggagaaagcactgtttgggacataacatccactgatga tgtggtcaacaggagaatagccatagacaaccattgttacggatgtacagcaggcatggggtccagctga |
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Protein
| Protein ID | pfu_aug2.0_172.1_07101.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_172.1_07101.t1 MSKIVFNNQIRINARVLHRWYTTGHGPELGTEKIKPDLPDYNTSIDIHEHKLQRPTKPPPMPKWDGLKNLSERTQGSLIP ETLKEMEKDGEFKETLRKLKEHGQKKLTREERKKRQRALDSLGVPDFLAFWIDRKKLHNMQDEETVLRKNTIEIVQANIG IYCNQACNHCHVESSPKRSEMMDRSVAEKILNILAKSPSVNILDITGGAPELCTEFRRLAKGGRDLGKEVIDRCNLTSLL EPGQEDTPEFLAENKIHIVASLPCYTPKNVNLQRGSKVFERSIHALQILNNLGYGKSDPDLQLDLVYNPLGAYLPPPQGP LEEKYREEMLNVFGIEFNKLYTMTNMPIKRFTDFLYRRNELQDYMELLVRNYNINTVPELMCRNLLSVSWNGRLYDCDFN QQLEMGIMGTDDTEGESTVWDITSTDDVVNRRIAIDNHCYGCTAGMGSS |
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