Gene
| Gene Model ID | pfu_aug2.0_1720.1_01798 |
|---|---|
| Locus | scaffold1720.1 : 119956 ... 123004 : + |
| To GenomeBrowser | scaffold1720.1:119956..123004 |
| Genes list of scaffold | scaffold1720.1 |
| Synonym | pfu_aug1.0_3188.1_16043 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1720.1_01798.t1 | 2 | 1 | AIG1 | 24 | 106 | 3.8e-06 | 26.1 | 1.1e-08 | 2.8e-05 | 23.3 |
| pfu_aug2.0_1720.1_01798.t1 | 2 | 2 | AIG1 | 388 | 405 | 3.8e-06 | 26.1 | 0.17 | 430.0 | -0.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1720.1_01798.t1 | gi|736262227|ref|XP_010790098.1| | PREDICTED: uncharacterized protein LOC104963230 [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_1720.1_01798.t1 | gi|554881736|ref|XP_005950617.1| | PREDICTED: uncharacterized protein LOC102290509 isoform X1 [Haplochromis burtoni] | 0.0 |
| pfu_aug2.0_1720.1_01798.t1 | gi|584031108|ref|XP_006810012.1| | PREDICTED: uncharacterized protein LOC102799398 [Neolamprologus brichardi] | 0.0 |
| pfu_aug2.0_1720.1_01798.t1 | gi|617509304|ref|XP_007542539.1| | PREDICTED: uncharacterized protein LOC103130944 [Poecilia formosa] | 0.0 |
| pfu_aug2.0_1720.1_01798.t1 | gi|557014707|ref|XP_006007849.1| | PREDICTED: uncharacterized protein LOC102351002 [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1720.1_01798.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1720.1_01798.t1 atgtcactaactgaatggataactacttacgtctttgttccaagcaaagcaacggaggatcgattgccatttacaataaa tgttgtggacacaccaggattcgctgatacacgaggccatgaacgagacattgaaattattgagcaaataacaaaatact ttgagagaaaacaaaacataaagggcacggttgaggcaatatgtttcctatttaaagcaagctgtactcggttgacgcca tcccagcgctacgtgtgtgaaactattatgggtctctttgggaaagatgtcgagcgaaacatatgcattgtaacaacgtt tgcatatggagatccacctgaagtccttggagttttaaaggcattagatattccacataaaccattttatcaattcaata atgtagctgccacagaggtagaaacacatggtctcacggaatacgatttgcattctgtgtttttcaagatgaataaaaga aactttgagatgttcattcatcacttacggaaacttgattcccgaagctttgccttatcattggaggtactggacaaaag aagggaagttgaacgcatcagagatagtttacatgaatccatacaagatgctgttttacaaatagaagactttcaaatag aattagaggttttcaaaaaatatgaggctccaattaatagaaatgagaatttttcctacgacgctgaacctaatactctc actgagcaagtcatagatacagagactgaatttgaagcgttaaactgcaaaaactgtaaaatcacttgccatcgaaactg ttcaagagcaaacggaaaaatcaatcaatgtattagtatgaatctaaatggctattgtaacatttgcccacaattttgtc actacaaggatcattacaaaagtaggacgattttcgttaagaaaaaattaaaaacacgtagaaactttcagaaacgttac ggtaagcaaacgacttatcagcagatcaaagatcgattaaaaagacaaatccaagagtgtgaaaaggaaataaatatgaa atcaaatatcattgtacatttgaactgtcagcttcaagacatagccttacgcctttcacctacgaacaccgatgcttact ttgatgaattattagcgaacatgaacagatgtcaaagtcagcgtgaccgagatgttaaagatatcatccagaaatgcaag gatcgcatgactgtcgacaaagatgtcattgagttcaaatttaaactacatgaggcaaaaaaggcgttagataccgaggt tggggagaagaatgttttatcaagattaagcaaagtcgttactttcctagtaaaacgtaagtgttccatccttgattgtg acttcagtgtgagttttttaaaatgtattatttaa |
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Protein
| Protein ID | pfu_aug2.0_1720.1_01798.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1720.1_01798.t1 MSLTEWITTYVFVPSKATEDRLPFTINVVDTPGFADTRGHERDIEIIEQITKYFERKQNIKGTVEAICFLFKASCTRLTP SQRYVCETIMGLFGKDVERNICIVTTFAYGDPPEVLGVLKALDIPHKPFYQFNNVAATEVETHGLTEYDLHSVFFKMNKR NFEMFIHHLRKLDSRSFALSLEVLDKRREVERIRDSLHESIQDAVLQIEDFQIELEVFKKYEAPINRNENFSYDAEPNTL TEQVIDTETEFEALNCKNCKITCHRNCSRANGKINQCISMNLNGYCNICPQFCHYKDHYKSRTIFVKKKLKTRRNFQKRY GKQTTYQQIKDRLKRQIQECEKEINMKSNIIVHLNCQLQDIALRLSPTNTDAYFDELLANMNRCQSQRDRDVKDIIQKCK DRMTVDKDVIEFKFKLHEAKKALDTEVGEKNVLSRLSKVVTFLVKRKCSILDCDFSVSFLKCII |
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