Gene
| Gene Model ID | pfu_aug2.0_1732.1_08542 |
|---|---|
| Locus | scaffold1732.1 : 46166 ... 56645 : - |
| To GenomeBrowser | scaffold1732.1:46166..56645 |
| Genes list of scaffold | scaffold1732.1 |
| Synonym | pfu_aug1.0_12059.1_24976 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1732.1_08542.t1 | 2 | 1 | Reprolysin | 179 | 195 | 3.5e-17 | 62.6 | 0.48 | 1000.0 | -0.9 |
| pfu_aug2.0_1732.1_08542.t1 | 3 | 1 | Reprolysin_5 | 181 | 379 | 1.0e-16 | 61.4 | 4.7e-20 | 1.0e-16 | 61.4 |
| pfu_aug2.0_1732.1_08542.t1 | 2 | 1 | Reprolysin_2 | 215 | 404 | 8.2e-14 | 52.0 | 2.8e-16 | 6.0e-13 | 49.2 |
| pfu_aug2.0_1732.1_08542.t1 | 2 | 1 | Reprolysin_3 | 219 | 358 | 4.1e-11 | 43.4 | 1.5e-13 | 3.2e-10 | 40.5 |
| pfu_aug2.0_1732.1_08542.t1 | 2 | 1 | Reprolysin_4 | 255 | 405 | 7.7e-11 | 41.9 | 7.3e-14 | 1.5e-10 | 40.9 |
| pfu_aug2.0_1732.1_08542.t1 | 2 | 2 | Reprolysin | 276 | 419 | 3.5e-17 | 62.6 | 5.0e-20 | 1.1e-16 | 61.0 |
| pfu_aug2.0_1732.1_08542.t1 | 2 | 2 | Reprolysin_2 | 549 | 596 | 8.2e-14 | 52.0 | 0.0059 | 13.0 | 5.8 |
| pfu_aug2.0_1732.1_08542.t1 | 3 | 2 | Reprolysin_5 | 550 | 589 | 1.0e-16 | 61.4 | 0.022 | 46.0 | 3.8 |
| pfu_aug2.0_1732.1_08542.t1 | 2 | 2 | Reprolysin_3 | 564 | 582 | 4.1e-11 | 43.4 | 0.31 | 670.0 | 0.8 |
| pfu_aug2.0_1732.1_08542.t1 | 2 | 2 | Reprolysin_4 | 564 | 589 | 7.7e-11 | 41.9 | 0.079 | 170.0 | 1.6 |
| pfu_aug2.0_1732.1_08542.t1 | 3 | 3 | Reprolysin_5 | 666 | 702 | 1.0e-16 | 61.4 | 1.8 | 3800.0 | -2.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1732.1_08542.t1 | gi|676430420|ref|XP_009045920.1| | hypothetical protein LOTGIDRAFT_237696 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1732.1_08542.t1 | gi|676493064|ref|XP_009066123.1| | hypothetical protein LOTGIDRAFT_236772 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1732.1_08542.t1 | gi|676481257|ref|XP_009062315.1| | hypothetical protein LOTGIDRAFT_235128 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1732.1_08542.t1 | gi|676493058|ref|XP_009066121.1| | hypothetical protein LOTGIDRAFT_236770 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1732.1_08542.t1 | gi|676448364|ref|XP_009051708.1| | hypothetical protein LOTGIDRAFT_152975 [Lottia gigantea] | 8.96831e-44 |
Transcript
| Transcript ID | pfu_aug2.0_1732.1_08542.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1732.1_08542.t1 atggatactaactctaacacagacctagtttcattggaattcgatattcaaaacaatgtgcgatggaggcgagacgttgg acaccaggaaaccctaaccgtccgtattagaacccccgatgacgtcattcctttacatcttcagcgtgtaagacgaagca gtccacaccccaaagtatttgtccccacagaaaatggagtcattgaagaaaaattatcaatatcccaggagaacaaatcc acctaccacgacccggaacatagtgccgcccttaccattaactggggacaggacatcaacatcaccaccatgcacggtac tttcctgcacaacgaaaagatgcatttcatagagcctcttcagagagaagtcagcatgccatcaggttctccaccaatac atagaatgactacatctgacgttcttattgactacttcagagatgctatagttattggaggtgaagagatgaccagcgag cgcctacaggaaccaatcagcgatcagaatggatacatcccaaaaacagacctatatgtagagtatgtcatagtggctga ttacaaaaattatcacaattgggctggcatggctgatgcgtctatccctgaacgagagaaagatgtgtacaccaaacaaa gaatggtggagttctaccaacacattgtgaccgggattgacgtgatcttcaagacagccaacagtgatagatacagcata aatattgtctttgctggaatcgtcatattcaatcacaccagaactccgccatggacagatcactacgccacgtgccccgg atgtgacacggtagatgattacctcgttctgaagagtttctcagaatgggcgtggatgtatttacaaaagataatcagac acgatcatgccgctttgttcacaggatttgacttgtattacactgcccaagaatcctcaaaaactatcggcctgtcatac ttgagcaaaatgtgcggcaattattcagtttccgtgatcgaggagaaaaggaacgctctttctgtgcacgttgcagcaca cgaattaggtcacaatttcggcgctaggcatgacgggaagacaggagcagaatcatgttcagcagacgacaaatatctga tggcgtcaaagatgtctcgggtggacaatcctgttatggcagggaatccttggagtttctcatcgtgttcacgctctagc attcatggctatattgaaaatctaacaagactgaatagaaactgcttattggattttccaaaagtagaagaaattcccca tgaacaacagcctggtcaatcctacacagttgacgagcaatgtcaggcaatgtatggccaacagtcgtttgtatgtaggt tttaccaccaacaagactggagtgcgatatgttacgggttagcctgctggagcccccagaactcagaatgtcaactgatt tatcctcacgacggcactccgtgttcaaaccaaaagtggtgccaacaaggtttctgtgtccatgatgaaagagcggacac tttggacgagacatgtccatttggtaacgatcctgtatacaactgttccgtccaagattgcataataggaagtttcacac atccattgtgttgtcagttctgtaaacaatatatcacctcaagttctacaagtgttacctcttcgctaccatctacaacg gcagtttcacgcgattctgaaacgagtactcttactaaacacgaggaaggacacactaatggcttgacaacggtatgtcc ttgtgcaggtaatgaaaaatcctctactgccagtacgcctcaacagtttgagaaaacttcaactgcaagttcaacggctc attccggcgcatcatcagaactcccaacgggaaccacaacatctgctcaacaagaactgtcgtcacctggttcaacgacg cgaacatcgaacactcctttttctgatttaacgtcaatgataactacttatattcctagtacgtcagagacacttaagtc ttctactacagttgcgagtacaacacagcatcccacaagtacaaccacggatatgaagacaactcctggattacaaatgc gaacaagtgaatatcattctacattgtctacaatatatactgaaagtagtacgagcaaaccagaaattacgagtacagga ataaaaactacgaatttacctcacagtcagacaacagaaaagacattgaaagttttccttctgaaagaccaagctaggat tgcggtttttatttctttacttgcggttatgtga |
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Protein
| Protein ID | pfu_aug2.0_1732.1_08542.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1732.1_08542.t1 MDTNSNTDLVSLEFDIQNNVRWRRDVGHQETLTVRIRTPDDVIPLHLQRVRRSSPHPKVFVPTENGVIEEKLSISQENKS TYHDPEHSAALTINWGQDINITTMHGTFLHNEKMHFIEPLQREVSMPSGSPPIHRMTTSDVLIDYFRDAIVIGGEEMTSE RLQEPISDQNGYIPKTDLYVEYVIVADYKNYHNWAGMADASIPEREKDVYTKQRMVEFYQHIVTGIDVIFKTANSDRYSI NIVFAGIVIFNHTRTPPWTDHYATCPGCDTVDDYLVLKSFSEWAWMYLQKIIRHDHAALFTGFDLYYTAQESSKTIGLSY LSKMCGNYSVSVIEEKRNALSVHVAAHELGHNFGARHDGKTGAESCSADDKYLMASKMSRVDNPVMAGNPWSFSSCSRSS IHGYIENLTRLNRNCLLDFPKVEEIPHEQQPGQSYTVDEQCQAMYGQQSFVCRFYHQQDWSAICYGLACWSPQNSECQLI YPHDGTPCSNQKWCQQGFCVHDERADTLDETCPFGNDPVYNCSVQDCIIGSFTHPLCCQFCKQYITSSSTSVTSSLPSTT AVSRDSETSTLTKHEEGHTNGLTTVCPCAGNEKSSTASTPQQFEKTSTASSTAHSGASSELPTGTTTSAQQELSSPGSTT RTSNTPFSDLTSMITTYIPSTSETLKSSTTVASTTQHPTSTTTDMKTTPGLQMRTSEYHSTLSTIYTESSTSKPEITSTG IKTTNLPHSQTTEKTLKVFLLKDQARIAVFISLLAVM |
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