Gene
| Gene Model ID | pfu_aug2.0_1734.1_15217 |
|---|---|
| Locus | scaffold1734.1 : 39581 ... 54595 : - |
| To GenomeBrowser | scaffold1734.1:39581..54595 |
| Genes list of scaffold | scaffold1734.1 |
| Synonym | pfu_aug1.0_12486.1_03243 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1734.1_15217.t1 | 1 | 1 | AdoMet_MTase | 248 | 290 | 5.5e-09 | 36.1 | 4.5e-12 | 1.3e-08 | 34.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1734.1_15217.t1 | gi|676448880|ref|XP_009051873.1| | hypothetical protein LOTGIDRAFT_115011, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1734.1_15217.t1 | gi|585702069|ref|XP_006822996.1| | PREDICTED: probable tRNA (uracil-O(2)-)-methyltransferase-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1734.1_15217.t1 | gi|50747274|ref|XP_420816.1| | PREDICTED: probable tRNA (uracil-O(2)-)-methyltransferase [Gallus gallus] | 0.0 |
| pfu_aug2.0_1734.1_15217.t1 | gi|597783167|ref|XP_007255112.1| | PREDICTED: probable tRNA (uracil-O(2)-)-methyltransferase [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_1734.1_15217.t1 | gi|432920098|ref|XP_004079836.1| | PREDICTED: probable tRNA (uracil-O(2)-)-methyltransferase isoform X1 [Oryzias latipes] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1734.1_15217.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1734.1_15217.t1 atggacagcaacgtgaattttcaaagtgttgaaactgttcaactcagaggatcatggtccaattttcttgatgctattac aattttcataaataagccacaagttttgaacagaaaattgtgtggctcgaaaattttgtatcaaagttttggagagggac aagaatacaatctaaaagttgaaagtgcactcaaaacaacatgctcattagagcaaagtgattctgtacatgaactgaac gaggtagagagtctttcatcatttacctgtgatgaagttggagtgatcctccgggatttactccccaagatgtcaaatta cgggaggcaaaaggaaataattgttgtcgactttaaagagaagttggcatcattctacccatctctaaaatctacggagc atcaagtgacaaatgacggacatgcagccagccctacaaatgctaatgaactacataagactgagagcagtgtatctgaa gacaatgacctgcatacgactagttcatcctgtgaccaacaagggctgagttcagacgctgatgctccagcggtttctct cagaaatgactccagcttacatcaggttaaaagtgaaggagaaacaaatgttcctcagagatcttatgcatccccaaatt tagcatatcaatttagatttgtggaatccagtgatggcatgaatagtaatttcaataacggattaatttttgtcactcct atggtaaactcaaattattttgccatttttgataaggtattatgggagcaggaaaggagagagaagaaactgacaaggaa gcagacatttgtagatttgggttgtgggaatggtttgctagtccatctactcacacaagaaggggaacaaactatagttc cttctgcagagaatacattcccagattatgattggttgattggtaaccatagtgacgagcttacaccctggataccagtc attgctgccaggtctcactttgattgccattttttcctcctgccgtgctgccatcatgattttaattctaaatttagcac aaagcaggctaacgagagttgttaccgatcgtatttaaactatgtgcgagaaataggcgaggtttgtcattacaagatgg aggaagacatgttaaggattccttccactaaaagaatatgtttcattggaaaagaaaggacttgcacaaaagaggaagag ggggaaatgaataaaggaatctcagattttattgaaatgaggtgcaaaatgcagtcaacatccaattcaaattcatcatc tagtcagaagaggactttagattctaaaaatagccagacggagcaatggacctcaggttttgtgcctcgtgaaaattttg aaacatctaagaattgtaaaggtgtagatcgttcactgacgaaccatattgtacagaaagtttttgatactctgcttact tgtcccgattgtgaagtgcgaaaactagcgaacgggaggcagtggaggaagggaggtacactacccctgtcagatgtggt caagctttttgataaggacaccatgatggcaatgaaagcccagtgtggtggacttcagaccttactcagaaatcacaaca gtgtttttaatgtttcaggtggcaaagtgcagcttcgtgatttgaccttgagtgaaccttacagtaaatattcaaagcta cgaaagaaggacaacagtgaatattttaagacaatgccgtgctggtttgatcgtaaccatccggacggctgtccgcggct agctgtggactgtaccttcgcacacaaggaggaagagttgaaagcgagacctgtcgctaaatag |
|
Protein
| Protein ID | pfu_aug2.0_1734.1_15217.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1734.1_15217.t1 MDSNVNFQSVETVQLRGSWSNFLDAITIFINKPQVLNRKLCGSKILYQSFGEGQEYNLKVESALKTTCSLEQSDSVHELN EVESLSSFTCDEVGVILRDLLPKMSNYGRQKEIIVVDFKEKLASFYPSLKSTEHQVTNDGHAASPTNANELHKTESSVSE DNDLHTTSSSCDQQGLSSDADAPAVSLRNDSSLHQVKSEGETNVPQRSYASPNLAYQFRFVESSDGMNSNFNNGLIFVTP MVNSNYFAIFDKVLWEQERREKKLTRKQTFVDLGCGNGLLVHLLTQEGEQTIVPSAENTFPDYDWLIGNHSDELTPWIPV IAARSHFDCHFFLLPCCHHDFNSKFSTKQANESCYRSYLNYVREIGEVCHYKMEEDMLRIPSTKRICFIGKERTCTKEEE GEMNKGISDFIEMRCKMQSTSNSNSSSSQKRTLDSKNSQTEQWTSGFVPRENFETSKNCKGVDRSLTNHIVQKVFDTLLT CPDCEVRKLANGRQWRKGGTLPLSDVVKLFDKDTMMAMKAQCGGLQTLLRNHNSVFNVSGGKVQLRDLTLSEPYSKYSKL RKKDNSEYFKTMPCWFDRNHPDGCPRLAVDCTFAHKEEELKARPVAK |
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