Gene
| Gene Model ID | pfu_aug2.0_1734.1_15220 |
|---|---|
| Locus | scaffold1734.1 : 111321 ... 123295 : - |
| To GenomeBrowser | scaffold1734.1:111321..123295 |
| Genes list of scaffold | scaffold1734.1 |
| Synonym | pfu_aug1.0_17023.1_69037 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1734.1_15220.t1 | 3 | 1 | MFS_1 | 176 | 413 | 7.8e-28 | 97.1 | 8.0e-14 | 4.0e-10 | 38.9 |
| pfu_aug2.0_1734.1_15220.t1 | 3 | 2 | MFS_1 | 428 | 531 | 7.8e-28 | 97.1 | 8.1e-06 | 0.04 | 12.6 |
| pfu_aug2.0_1734.1_15220.t1 | 3 | 3 | MFS_1 | 662 | 929 | 7.8e-28 | 97.1 | 4.5e-17 | 2.2e-13 | 49.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1734.1_15220.t1 | gi|548336199|ref|XP_005720842.1| | PREDICTED: proton-coupled folate transporter-like isoform X2 [Pundamilia nyererei] | 8.0e-30 |
| pfu_aug2.0_1734.1_15220.t1 | gi|554810197|ref|XP_005915979.1| | PREDICTED: proton-coupled folate transporter-like isoform X2 [Haplochromis burtoni] | 1.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_1734.1_15220.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1734.1_15220.t1 atgtcaacatctttcaatagtaatgattggaaccgagaagaagaatctgataccgaggaagctgctagtacactgacgaa gaaacagtcagcatctgctcagacaaagatttctttatttattgcatgtggaacaattctnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngctagtacactgacgaagaaacagtcagcatctgctcagaca aagatttctttatttattgcatgtggaacaattctgttttgtcatggtttcgcaacaggtttaagggataatacgctaag tcaatattcatacaaggagttccaaactataacaaatttggcaggttctagtaatttgtccaaaatggacacttttaacg aatctggcatttctgcatcttgcgcaaaaagttcgaatgataaagtttatgaaggacaaacggaagcacagaagttgacg tcacaatggaatatctatagaaatgtaatacctggcgcaacatcaatattgccaactattttatttggagttttaagtga cacctacgggagaaaacgatttataattatccaacttataggacattttacaaggaattctctctatacagttggtattt actttaaatttgatatctatatattcccagcgataggtttgattgattttctgtttggttccggagaaatgcttcttgcg ttgatttttgctacagttgcagataacacaatcgccgataaaaatcgttccaaagttattgcaataatgcttttggcgtc gggtctaggatcatcgacttcgttagtttctggaggatacataatagattcacctggctatatgtatcctatgctaatat cctcacttattcttctccctgctatagtcctctccatttgtctttcggaatcttcggaaaataggactgtgtcatcaact gataatgaagatacattcagtaagaaattgatcaagcagctcaaaggaatatatgaattttacgtaaaagatatctctgt ttcaggcaaaagatggaaatatatcgtatgtatgctatcttttctttttgatcacattgttaacggtggagttagcaatg ttgaatttctattcactttcaatacacctctatgttggaactccgtaattttcggttggtatggactcgctcaagcagtg tccctgcagatagtgtcaatggccctcttccaattcattcagaaatgctttaaggatgagacaatcaacgtcattggttc gatgagtagtgcagtatctctaacctatgaggcgtttgcagtcaatgatgaaatgatgtttataggaacattgttcgcaa gtcaagcaatcgtggaaaaggtgtgctatttactgggaacaactataggcaatggcatatacggagccacagtggacatt tacagaggcttcgcatttttcgtgttcgctgcattcaacgtcatagcggctgcattaattgtctattatatccgtcgaac caagagcgaatctgagaaggagaaagaggaatgtgaagcaaaagatacattggagagaaatacagaaattaaagcgtatc aatctgagatggtagaatcggactgttgtttggaaatgaagattgaaaaaggttcagaaaggaaggaagtaacaagtact ccgactaaggaagatgaatcagagcctcggacgaagcttaccttatttttcatatgtggcacattgctcttttgtcattt ctttgcgcaaggcttgagagaaaatgcactgaatcaatactcatacaaggaattccaaagcatggtggagcaagacgttt ccgggaatgcgtccatggcagacgcttacaatggatctgtatctgatatttctgtatcatgtgtaaaaagttccaattct acactatatgaaggacagagtgaggcacaaaggttgacgtcacaatggaatatctatagaactgtaatacccggagcagc atctattcttactactctcttatttggggttttgagtgacacttatggacgaaaatggtttattacaatccctttgatag ggcattttgttcgtaatgctctatatacaattggtatatacttccgaattgatatctacatatttctagcgataggtatg actgaatttctgtttgggcctggcgaggcaattctcgcagcaatattttcaacggttgcagacaacacatctgcagataa aaatcgttcaaaagttcttgcaataatgattttgtcggctggtgtaggactttcgacgtcattggtatctagtgggtata ttatagactcggcaggttatatgtatcctatgttgatatcatcagctattcttcttccagccataatcctatccttttgt ctttcggattcttcagggaatagaactgtgtcatcagctgacaataaagatactttcagtaagaaaattattaaacagct caaaggaatatatgagttttacgtaaaagattcctccgtttcaggcaacagatggaaatacatcgtgtgtatgttagctt ttcttttaactcaaatcgttaatggtggcgttgttaacgttgagttcttatttaccttcaacacaccgctatgttggaat tccattatattcggttggtacggcctagctcaatcggtaactttgaacatagtatcgatggccttctttccactcataca gaaatgtttaagagatgagacgattaatgtaattgcgtcgatcagtagtgcagtttccttaatcttcgaggcgttcgcaa taaatgacatcatgatgtttataggtaactattttgagtacataagataa |
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Protein
| Protein ID | pfu_aug2.0_1734.1_15220.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1734.1_15220.t1 MSTSFNSNDWNREEESDTEEAASTLTKKQSASAQTKISLFIACGTIXXXXXXXXXXXXXXXXXXXXASTLTKKQSASAQT KISLFIACGTILFCHGFATGLRDNTLSQYSYKEFQTITNLAGSSNLSKMDTFNESGISASCAKSSNDKVYEGQTEAQKLT SQWNIYRNVIPGATSILPTILFGVLSDTYGRKRFIIIQLIGHFTRNSLYTVGIYFKFDIYIFPAIGLIDFLFGSGEMLLA LIFATVADNTIADKNRSKVIAIMLLASGLGSSTSLVSGGYIIDSPGYMYPMLISSLILLPAIVLSICLSESSENRTVSST DNEDTFSKKLIKQLKGIYEFYVKDISVSGKRWKYIVCMLSFLFDHIVNGGVSNVEFLFTFNTPLCWNSVIFGWYGLAQAV SLQIVSMALFQFIQKCFKDETINVIGSMSSAVSLTYEAFAVNDEMMFIGTLFASQAIVEKVCYLLGTTIGNGIYGATVDI YRGFAFFVFAAFNVIAAALIVYYIRRTKSESEKEKEECEAKDTLERNTEIKAYQSEMVESDCCLEMKIEKGSERKEVTST PTKEDESEPRTKLTLFFICGTLLFCHFFAQGLRENALNQYSYKEFQSMVEQDVSGNASMADAYNGSVSDISVSCVKSSNS TLYEGQSEAQRLTSQWNIYRTVIPGAASILTTLLFGVLSDTYGRKWFITIPLIGHFVRNALYTIGIYFRIDIYIFLAIGM TEFLFGPGEAILAAIFSTVADNTSADKNRSKVLAIMILSAGVGLSTSLVSSGYIIDSAGYMYPMLISSAILLPAIILSFC LSDSSGNRTVSSADNKDTFSKKIIKQLKGIYEFYVKDSSVSGNRWKYIVCMLAFLLTQIVNGGVVNVEFLFTFNTPLCWN SIIFGWYGLAQSVTLNIVSMAFFPLIQKCLRDETINVIASISSAVSLIFEAFAINDIMMFIGNYFEYIR |
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