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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_17340.1_03232
Locus scaffold17340.1 : 1 ... 1825 : -
To GenomeBrowser scaffold17340.1:1..1825
Genes list of scaffold scaffold17340.1
Synonym pfu_aug1.0_6628.1_31251

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_17340.1_03232.t1 gi|524890022|ref|XP_005101561.1| PREDICTED: lipoxygenase homology domain-containing protein 1-like [Aplysia californica] 7.0e-26
pfu_aug2.0_17340.1_03232.t1 gi|676464352|ref|XP_009056895.1| hypothetical protein LOTGIDRAFT_162634 [Lottia gigantea] 5.0e-18
pfu_aug2.0_17340.1_03232.t1 gi|260821892|ref|XP_002606337.1| hypothetical protein BRAFLDRAFT_67580 [Branchiostoma floridae] 1.0e-17
pfu_aug2.0_17340.1_03232.t1 gi|557281990|ref|XP_006023932.1| PREDICTED: lipoxygenase homology domain-containing protein 1-like [Alligator sinensis] 1.0e-16
pfu_aug2.0_17340.1_03232.t1 gi|564240695|ref|XP_006277177.1| PREDICTED: lipoxygenase homology domain-containing protein 1-like [Alligator mississippiensis] 1.0e-16

Transcript
Transcript IDpfu_aug2.0_17340.1_03232.t1
Definition-
>pfu_aug2.0_17340.1_03232.t1
gtcaaagtgaaagataatgataccaaggaagaattacagtttatttataatgaccttttgacctgtacggaggataatcc
tgatggtagcgttgaacttccggccgttagaccagacatagctcctctacaagaggatgaatacaccttttacattgcta
cgggtaaccgccctgaggcagcgacagagtcagatgtgttctgtgagctgattggtgactggggaagcagtgggcggaga
ttactcactcagtctaaaaataaagtacctttcaagcgtggccaggttgatgagttcagatttaaaggtttggatttggg
caacttgaaagaatgtgcgataagtctaaatgccagagg

Protein
Protein IDpfu_aug2.0_17340.1_03232.t1
Definition-
>pfu_aug2.0_17340.1_03232.t1
VKVKDNDTKEELQFIYNDLLTCTEDNPDGSVELPAVRPDIAPLQEDEYTFYIATGNRPEAATESDVFCELIGDWGSSGRR
LLTQSKNKVPFKRGQVDEFRFKGLDLGNLKECAISLNAR

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