Gene
| Gene Model ID | pfu_aug2.0_174.1_13727 |
|---|---|
| Locus | scaffold174.1 : 98696 ... 123363 : + |
| To GenomeBrowser | scaffold174.1:98696..123363 |
| Genes list of scaffold | scaffold174.1 |
| Synonym | pfu_aug1.0_3823.1_08733 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_174.1_13727.t1 | 2 | 1 | REJ | 202 | 331 | 1.5e-29 | 102.6 | 2.2e-06 | 0.0046 | 15.3 |
| pfu_aug2.0_174.1_13727.t1 | 2 | 2 | REJ | 688 | 923 | 1.5e-29 | 102.6 | 1.8e-27 | 3.8e-24 | 84.8 |
| pfu_aug2.0_174.1_13727.t1 | 2 | 1 | PKD_channel | 994 | 1069 | 0.0 | 275.6 | 0.042 | 89.0 | 1.3 |
| pfu_aug2.0_174.1_13727.t1 | 2 | 1 | PLAT | 1413 | 1454 | 2.9e-11 | 43.7 | 0.0028 | 6.0 | 7.2 |
| pfu_aug2.0_174.1_13727.t1 | 2 | 2 | PLAT | 1548 | 1643 | 2.9e-11 | 43.7 | 4.0e-12 | 8.5e-09 | 35.7 |
| pfu_aug2.0_174.1_13727.t1 | 2 | 2 | PKD_channel | 1797 | 2229 | 0.0 | 275.6 | 0.0 | 0.0 | 275.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_174.1_13727.t1 | gi|699239916|ref|XP_009857850.1| | PREDICTED: polycystic kidney disease protein 1-like 2 [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_174.1_13727.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_174.1_13727.t1 atgataccttcgataacacgctatggtgaattcattcacatattcatcgacaggtgtgtacttgtcaaagcaacaaacat agctattatacaaaaggtatcagaattctgcatcgagtggacggtggttggtctgcatggagccgctggttttgtgaaga tactaacaacggaaccagactgcggaaccggacgtgtacagaaccagtcagatgtaatggcggagatgactgttccggtg acgcggaggaatatgagtaaattggcgatatttagacgctattttaaaggaangttaacagatgatgtgaaaattgatgg aaactggtccccatggagcaaattttcttcgtgtagcgtaacaatgagtcacggtaccaaacgtagatggcgaacctgta ccgacccggaaacatgtactggcgaaccttgtgagggtgtcggagatgactacagccattgtgaaatcataccaaaacaa ttcagcggaccagcgtttggagagaattatatgactgaaaatgatgcgctagcattttactctgttgctaatatacatat cttcccaacggcacaattagattcgcggtattatgggcatcgcgaatggactctgttcaggataacagaaacaggaaatg aaactcttctcgattacaagaacgacaactctctcagttatgccatcggacctggtgatttatctgatggattgcataaa ctgtacttaacattttacacatttaacaattctgcagaatacgttcatggatggatgtatttagagagtatttatccccc acctcgtgtatttatacaaggaggatcagggaaagttagtggcccgggcgaaatcaaattcgatgcaagatctggctcct atgacctacttttaggtcctggtcatccagagtcgttgaattttacatggtcttgccacgagtttcctacgacaaagtta gatgaactgatcgggatcaatataaatccaaagtacatttacttaaatgacggtgaacaagtaaacattacatggagcac gtttgacacagtgctgaacatgtcggattgggtgtcgtctgcgtcattgtttactaacattggactcataagtcaaactg ccttggatcatgacttcaatctttttaacacagtgatggataaaagggcagatatgacttgtcagagtattttggcgtct cctaatgactgcccagaaagtttcaacggttcggacacatgccttatttatttcaacacttctttctcctgtgctattcc aacaggatatttttgctacaataatatcagatcgcctatccgctgtgaaggaagtgtgtacaatggcggtaaccaatcat gtatcgattatttaaaggactcatgtgacgcaaaggcggaatataactccaaagtctggaatggaacggaatatgatcac gtgatggaaacctacgtttttgagaacctattggcccatatcaagcagatgtctatcgatctaaggcagcgatctcaata tctgataggtggatccatggcctttggattcaaactgggtgcagccatggtcacagaaacgaacgatttatctacaagac ttaaaagtcacagtgataaattagtcggtttacgcagattgatgttagatttggaaaacctcagtggaggaataagattt cgtaactctggtatgaccagtttctcagattatctgacgacatggcacaatctaacagacagatcggccactcttccaag tactttgtacgaattctaccaaaacacaacactttacaacgccgccactctgaaaactttggaggaagacaccgagcgtc tcactgccctgtacgagggtctttttgcaaacgactcgtgcccgggtttctcgggaaattcgaaaggttacgccgaaatt cacacaaacggtagcgcgggtggcgacattcgcggttttatcgtgactgtaaaagctaatgttgggcaatccagaagtta catgacttttcaacaaagtttacaaatacagtctccgttgaacacgactccgacagactccagacatcaagtaaatggag gaatcccaaaattggagattcaatgtagattgaattgtaaacaaaaggtggcaagcacatctgtactctctctaagggca gtttgcgctacttgttccttttatgaaatgcgcaatgcaactttcttttggaatttccagaagattgatatgtattatag agatacacagaatttctcaaaatggaagaatggacttgaaacagatattaacagcgaaaagtttgtgttgtctgcgcaca ctctagatcccggaaaacattatttgatttcggtgtacatgtatctggagaacggaagtagcgctctgtcgatgatgatc attgaaacaacccagccaccctacagttacactggtgtcaagtgtgaaatatcaaaggagggaaacaacactgttgacat caagttgtttgggtggatggatgaaggttacagagatgagcgggatcctgatttagattggaaagaacagctgacgttcc gtgttttacaaagggacagtaaaacgggcctgagcacacttctctactttggtggtgaaaaatggctgagaaacataacg cttaacgagggatacattgaagacaactacctggtggaggtctatatacagatattcgacacttttgacgactatgccga ctgcgtgcttaagtctattcagatttatcctttggaaatggaatcactgacttcgtcaatggataaaatagaaagtgctt tgctgtctgggaacgccaaagtcgtctcaatgattaccgaaacagctgccaattctatagtgaacgaggagtttcctccg gcacttgtggacgatccagcccaatggacaagtattggaacattcccctcaggatctaatgatagtagtgtgacatttga agatctgcttaatagtctggattctagtaagaatgaatcagcaaagaaactttactcagagacacttgagaaatactctt cctccatgacgtcatcaatccaaaccctagaaatgtacgacgttgttagtttgagacaaaatacgcatgcgctggggact ctaatgagtaacaaagacttattggtggatgaaatactggtctcatctgttaattcaagtttaaagataatagacaaatt aaggcaattccaagaagaatccatcttcccagtatttgaagaatactacggagcatctgatgatcttgtacgtgcgctgg acaaggctttagatggactcgttccagctctagatgcggatataccggatacatctaagctctcggaccttcaaaatgac cttcagaagcaagaagaatttgcagtgacggatacgaatttcacgacggcggaacgtgcattcttgctatctttgttaac ggcagaacatcaacgcgacctgtctgcttccattgatttggctgatgatcttgttccggaaatggagaccgttttgacaa agcttggaacagtgttagatggtataagttacaggaaacagctccccatttatgtagaaaaggaaggtctcaagtcaagt ctgaatcagttgaacagcatagacctgaaagctagcagtatcggtataggaaattcaatggtcaggttggaccccaaaag taatacaagcgtgaaggactacagtattcaggtttcaaccttatcaaaatcaccttatatttggaactcagacacaaaga ataatgaaatcatccaaaggcttgccaataaggttgctaataacacaacggcaacatcttatttatggacaagcggtcca tctaacactaccacagaatcgacacatttggcagactacacagtgaagacgtggacatcgggttgtcgaaactggaatcc ttccactaatacttgggataaatcctcatgttatgttacatcagagtcatcaattacagacaccgtgtgtcattgcgctc atcctattggtacaacatttgctagtactttctacgttccaccgaatacaatagacttcagcacagtgttttcaaagttt gatttaatcagtaatggagccgttttcggaacggtcatagccttagtgcttctgtacctacttttgttgatctgggcggt gagaaaggacaagcaagacgcagcaaagggatatatttctttcctaacggacaatatgaaaatagacgagtatgtgtaca tactgacagtcaccaccggtctttctagaaattctggcactcaatccaacgtaagcttcatcctaactagtgagaaaagg gaaactggcgtccgtcaactagatgatggcatacaaaaggttacatcagagtcatcaattacagacaccgtgtgtcattg cgctcagcctattggtacaacatttgctagtactttctacgttccaccgaatacaatagactttagcacagtgttttcaa agtttgatttaatcagtaatggagccgttttcggaacggtcatagccttagtgcttctgtacctacttttgttgatctgg gcggtgagaaaggacaagcaagacgcagcaaagggatatatttctttcctaacggacaatatgaaaatagacgagtatgt gtacatactgacagtcaccaccggtctttctagaaattctggcactcaatccaacgtaagcttcatcctaactagtgaga aaagggaaaccggcgtccgtcaactagatgatggcatacaaaaggggtttgagactgcaagcgtccgaaggttcgtcatg acaacaccgaaatgcataggtgatcttagttacctaaatatatggcatgacaattctggcaaaggcaaccaagcttcttg gaatctgaagaaaatggtggtagatgatatacaaactggagagagcatggaatgggggaaacataaatcagaggaatggc tgaaatgcttctttctttcatggatagagtctttattgctgattgatcccataaaggtcatcgtactttcgacaattttg gcattgtgccttaagagcaaacaaaaagggaaagaagtaaactacaaaaaagatgaacttttatcagaggcaaaagaacg agctgtatcctcactaaggatcattcttgaatccccatctcaagggatcattatggatgatagtacagtgggacgccttc gggagagaagaaaagctgaaatgagaaccgtcaggattttttgggaactaatcgcttatctaataatgcttgcaataatt tacctcatcagctatagtaatagggaccaaagatcgttcatggctcgtcaacactttgacaatcatttactgaaacaagt caatccaatttccacaacagaacctctgaaattttcaaaggtagcctcggtggaacaatattacgagtggctatacaaca ccttgttaccttttgcctttgccgagtactggtacaacagtgacaaaatgaatacagatgaacgaggctttatggacgat ctggtaaattacagggttggtccaatacgactaaggcagctaagagcaaaagaagtggaatgcttggtaccaattatgtc aaatctgcagtgttatgacgactacagtgtctttagggaggacacaactgattactgcgagggttgggagacccaaaact gctcagcatatgtaacttatgaacatttatctctggagtcatggagattcacctcctctaaggacatatggggaatgcct gtcaccggggaaatatccacatacggagggggagggtacatagctgaactcggtgttaacctggaattatcaaggatgat actggatgatcttcagaagtatgaatggatagatagaaaaacaagagcagtagtgactgagtttaccatctacaatgcca acgttaatctattcacttatttctctttacttactgagttaccagaattcggaggcattcttacatatagttttgttcgt atattccgtccgtatcaacatttgggtgacatgggcgtctttgttttcgtatgcgaatttattttcctcatagcagtgtt agttgtttccacaaggatgggagttgagatctatcgccgcaagaccaacttcttcaaagaatcatgggaaatatttgacc tggtcattctcatcctaactctgtttactatcgcagtttacattgtaagacttgtgtttgcagaaatgacaatgaacgaa ttcttgaagaacaaatataaaccggttaattttgcccatgtggcagtttgggatgaagttttcatggcttttgtaggaac attggtaggacttgtcacggtccgtttaatgagagttttaagctacagtaaacgtctgactgaaattgcatccgttttgt cacacggctcaaaagaacttgtaggggttttcattatgtttttcatagttttctttgcatacatctgtattggctatctc gtatatggacgtacacttggaaactataggaacctttttgtatcttctactaccattatcaatgctataattggcaaaaa caatatagagggccttcttggagcttcgccagtgattgctcaaatatattattttacattcgttttattcgtcatgtgga ttttgatgacgatgatgaatgcgacattgaacaatagcattacggccgtacgtgacgtcaggatgcacgatgaagaagga aaaaataattacggtatatatgacttggtgaaacagacatgtttagacatgacgtcagatatactctctatctttggatc acagaagaaagagcgaccaatgacagcacgagatatcgagatcgaggttgaagatttgaccaatgaaagagcgccatcaa caaatgacgacggtgacgtggaaaagggcaactaa |
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Protein
| Protein ID | pfu_aug2.0_174.1_13727.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_174.1_13727.t1 MIPSITRYGEFIHIFIDRCVLVKATNIAIIQKVSEFCIEWTVVGLHGAAGFVKILTTEPDCGTGRVQNQSDVMAEMTVPV TRRNMSKLAIFRRYFKGXLTDDVKIDGNWSPWSKFSSCSVTMSHGTKRRWRTCTDPETCTGEPCEGVGDDYSHCEIIPKQ FSGPAFGENYMTENDALAFYSVANIHIFPTAQLDSRYYGHREWTLFRITETGNETLLDYKNDNSLSYAIGPGDLSDGLHK LYLTFYTFNNSAEYVHGWMYLESIYPPPRVFIQGGSGKVSGPGEIKFDARSGSYDLLLGPGHPESLNFTWSCHEFPTTKL DELIGININPKYIYLNDGEQVNITWSTFDTVLNMSDWVSSASLFTNIGLISQTALDHDFNLFNTVMDKRADMTCQSILAS PNDCPESFNGSDTCLIYFNTSFSCAIPTGYFCYNNIRSPIRCEGSVYNGGNQSCIDYLKDSCDAKAEYNSKVWNGTEYDH VMETYVFENLLAHIKQMSIDLRQRSQYLIGGSMAFGFKLGAAMVTETNDLSTRLKSHSDKLVGLRRLMLDLENLSGGIRF RNSGMTSFSDYLTTWHNLTDRSATLPSTLYEFYQNTTLYNAATLKTLEEDTERLTALYEGLFANDSCPGFSGNSKGYAEI HTNGSAGGDIRGFIVTVKANVGQSRSYMTFQQSLQIQSPLNTTPTDSRHQVNGGIPKLEIQCRLNCKQKVASTSVLSLRA VCATCSFYEMRNATFFWNFQKIDMYYRDTQNFSKWKNGLETDINSEKFVLSAHTLDPGKHYLISVYMYLENGSSALSMMI IETTQPPYSYTGVKCEISKEGNNTVDIKLFGWMDEGYRDERDPDLDWKEQLTFRVLQRDSKTGLSTLLYFGGEKWLRNIT LNEGYIEDNYLVEVYIQIFDTFDDYADCVLKSIQIYPLEMESLTSSMDKIESALLSGNAKVVSMITETAANSIVNEEFPP ALVDDPAQWTSIGTFPSGSNDSSVTFEDLLNSLDSSKNESAKKLYSETLEKYSSSMTSSIQTLEMYDVVSLRQNTHALGT LMSNKDLLVDEILVSSVNSSLKIIDKLRQFQEESIFPVFEEYYGASDDLVRALDKALDGLVPALDADIPDTSKLSDLQND LQKQEEFAVTDTNFTTAERAFLLSLLTAEHQRDLSASIDLADDLVPEMETVLTKLGTVLDGISYRKQLPIYVEKEGLKSS LNQLNSIDLKASSIGIGNSMVRLDPKSNTSVKDYSIQVSTLSKSPYIWNSDTKNNEIIQRLANKVANNTTATSYLWTSGP SNTTTESTHLADYTVKTWTSGCRNWNPSTNTWDKSSCYVTSESSITDTVCHCAHPIGTTFASTFYVPPNTIDFSTVFSKF DLISNGAVFGTVIALVLLYLLLLIWAVRKDKQDAAKGYISFLTDNMKIDEYVYILTVTTGLSRNSGTQSNVSFILTSEKR ETGVRQLDDGIQKVTSESSITDTVCHCAQPIGTTFASTFYVPPNTIDFSTVFSKFDLISNGAVFGTVIALVLLYLLLLIW AVRKDKQDAAKGYISFLTDNMKIDEYVYILTVTTGLSRNSGTQSNVSFILTSEKRETGVRQLDDGIQKGFETASVRRFVM TTPKCIGDLSYLNIWHDNSGKGNQASWNLKKMVVDDIQTGESMEWGKHKSEEWLKCFFLSWIESLLLIDPIKVIVLSTIL ALCLKSKQKGKEVNYKKDELLSEAKERAVSSLRIILESPSQGIIMDDSTVGRLRERRKAEMRTVRIFWELIAYLIMLAII YLISYSNRDQRSFMARQHFDNHLLKQVNPISTTEPLKFSKVASVEQYYEWLYNTLLPFAFAEYWYNSDKMNTDERGFMDD LVNYRVGPIRLRQLRAKEVECLVPIMSNLQCYDDYSVFREDTTDYCEGWETQNCSAYVTYEHLSLESWRFTSSKDIWGMP VTGEISTYGGGGYIAELGVNLELSRMILDDLQKYEWIDRKTRAVVTEFTIYNANVNLFTYFSLLTELPEFGGILTYSFVR IFRPYQHLGDMGVFVFVCEFIFLIAVLVVSTRMGVEIYRRKTNFFKESWEIFDLVILILTLFTIAVYIVRLVFAEMTMNE FLKNKYKPVNFAHVAVWDEVFMAFVGTLVGLVTVRLMRVLSYSKRLTEIASVLSHGSKELVGVFIMFFIVFFAYICIGYL VYGRTLGNYRNLFVSSTTIINAIIGKNNIEGLLGASPVIAQIYYFTFVLFVMWILMTMMNATLNNSITAVRDVRMHDEEG KNNYGIYDLVKQTCLDMTSDILSIFGSQKKERPMTARDIEIEVEDLTNERAPSTNDDGDVEKGN |
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