Gene
| Gene Model ID | pfu_aug2.0_174.1_13731 |
|---|---|
| Locus | scaffold174.1 : 159646 ... 164766 : + |
| To GenomeBrowser | scaffold174.1:159646..164766 |
| Genes list of scaffold | scaffold174.1 |
| Synonym | pfu_aug1.0_3823.1_08737 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_174.1_13731.t1 | 2 | 1 | MFS_1 | 4 | 238 | 9.7e-12 | 44.2 | 1.3e-15 | 9.7e-12 | 44.2 |
| pfu_aug2.0_174.1_13731.t1 | 2 | 2 | MFS_1 | 258 | 286 | 9.7e-12 | 44.2 | 0.031 | 230.0 | 0.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_174.1_13731.t1 | gi|390346350|ref|XP_786299.3| | PREDICTED: major facilitator superfamily domain-containing protein 1 isoform X1 [Strongylocentrotus purpuratus] | 4.00001e-40 |
Transcript
| Transcript ID | pfu_aug2.0_174.1_13731.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_174.1_13731.t1 atggacagagtggtctccttctggtttgccgaccgtatagaatttgcatggggagtcacaatttccatggcccgacttgg tacagtaatgaatttcatagggactgcatatattgccgagaaattaacgttagacattgcatgctgggtaggtgctttgc ttggggctttgaccttcctattggccattgtgcttgtctgtttagacgtatatggagcaagaagatcaaacgtctatcaa cgtcatgatactgaggccaaaaagctgagctttgggaggattaaagaattcaatctacagttttggtttttaatcataat tctagcagcattttatgcaaattttaatccatttgtatccaatggaagccaatggatgagtgacaaatacggaatccata aaacaacagcatcatacatagtcggaatttcctctgatgtagccgtaattttttctcccatattcggagctttattgact agatttggcggcagatcttttgcggttttcctaggatgtgtattaattatacctgtgtatgtgcttgtactatttacacg tgtttctccaatcatcataaatattgtaatgggatttaattatgtctttattgtggtaagcctatggcctgctatttcca aaagtgttcccgtggatctagtcggcacagctcttggtatcacaagtctattctctggaatattagcaggtctaagcacg ctaggagtgggtaaactactgaactatctaaacgaggacaaagcaccatactctatgagcagttgggccatggtcatggg tatttttctgggaatatctggaatatcattgttggcttccttgccagctctcataatggatctcaataggatatgtagaa gaagacgaagaactagtattagtaagacttcgaagcgagatgtgaatgaaaatgaccctttggttaactga |
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Protein
| Protein ID | pfu_aug2.0_174.1_13731.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_174.1_13731.t1 MDRVVSFWFADRIEFAWGVTISMARLGTVMNFIGTAYIAEKLTLDIACWVGALLGALTFLLAIVLVCLDVYGARRSNVYQ RHDTEAKKLSFGRIKEFNLQFWFLIIILAAFYANFNPFVSNGSQWMSDKYGIHKTTASYIVGISSDVAVIFSPIFGALLT RFGGRSFAVFLGCVLIIPVYVLVLFTRVSPIIINIVMGFNYVFIVVSLWPAISKSVPVDLVGTALGITSLFSGILAGLST LGVGKLLNYLNEDKAPYSMSSWAMVMGIFLGISGISLLASLPALIMDLNRICRRRRRTSISKTSKRDVNENDPLVN |
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