Gene
| Gene Model ID | pfu_aug2.0_174.1_13734 |
|---|---|
| Locus | scaffold174.1 : 271107 ... 276913 : - |
| To GenomeBrowser | scaffold174.1:271107..276913 |
| Genes list of scaffold | scaffold174.1 |
| Synonym | pfu_aug1.0_23972.1_47617 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_174.1_13734.t1 | 1 | 1 | Fibrinogen_C | 68 | 198 | 3.0e-37 | 128.4 | 2.59997e-41 | 3.9e-37 | 128.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_174.1_13734.t1 | gi|597753552|ref|XP_007238603.1| | PREDICTED: angiopoietin-2 [Astyanax mexicanus] | 6.0e-33 |
| pfu_aug2.0_174.1_13734.t1 | gi|554825254|ref|XP_005923268.1| | PREDICTED: angiopoietin-related protein 1-like [Haplochromis burtoni] | 1.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_174.1_13734.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_174.1_13734.t1 atgaagaaatgtccattggtatacccaaatcctggatttacgattgttccatcgtcatgtaaaactactcctaaaagtct atgtagtctgatgtgcaatgagaaatacaattcgtctgctgccgataacagtgattacatctctagatgtcttccatcag gaaactggtctatcttagacccgcagtgcaaactttggaactctgattgtcaaacacttaaatctcttggatacaattcg agtggtgtctacaacataactgtgaaaggggaggaattggaggcatactgtgacatggagacagaaggcgggggttggac ggtagtgacgaagagattcgatggatctattggcttctacaagaattggaatcaatacaaattaggatttggcaacatca gaggagaacactggcttggaaacgaatacatccacaccttgacatgggaaagaaattacggagtgtactttaagttacag acttggaaaggaaagtggtactgggcttggtatgcttcttttttccttcattcagaaaaagacgggtacaggatcaaatt tggagggtatcgaggaaatgcagttcaaaacggtcgtggtggctcggcgtacgggcacgttcgtcggcgtccttactacg acctcaatacgtatcagcgagttcttactacgttccccgcgtctttactacgttcacgccacgtttcgtacaatttggcg gtcgttgtgcgaacgccatgccagaacgtgaaggtgtga |
|
Protein
| Protein ID | pfu_aug2.0_174.1_13734.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_174.1_13734.t1 MKKCPLVYPNPGFTIVPSSCKTTPKSLCSLMCNEKYNSSAADNSDYISRCLPSGNWSILDPQCKLWNSDCQTLKSLGYNS SGVYNITVKGEELEAYCDMETEGGGWTVVTKRFDGSIGFYKNWNQYKLGFGNIRGEHWLGNEYIHTLTWERNYGVYFKLQ TWKGKWYWAWYASFFLHSEKDGYRIKFGGYRGNAVQNGRGGSAYGHVRRRPYYDLNTYQRVLTTFPASLLRSRHVSYNLA VVVRTPCQNVKV |
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