Gene
| Gene Model ID | pfu_aug2.0_1740.1_01801 |
|---|---|
| Locus | scaffold1740.1 : 1 ... 21755 : - |
| To GenomeBrowser | scaffold1740.1:1..21755 |
| Genes list of scaffold | scaffold1740.1 |
| Synonym | pfu_aug1.0_8850.1_38830 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calpain-6 isoform x2 | GO:0008234 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1740.1_01801.t1 | 1 | 1 | Peptidase_C2 | 30 | 241 | 0.0 | 244.4 | 0.0 | 0.0 | 243.9 |
| pfu_aug2.0_1740.1_01801.t1 | 1 | 1 | Calpain_III | 235 | 336 | 6.2e-22 | 77.8 | 1.4e-25 | 1.0e-21 | 77.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1740.1_01801.t1 | gi|676482980|ref|XP_009062876.1| | hypothetical protein LOTGIDRAFT_129270 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1740.1_01801.t1 | gi|573889916|ref|XP_006632721.1| | PREDICTED: calpain-5-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_1740.1_01801.t1 | gi|641767034|ref|XP_008168259.1| | PREDICTED: calpain-6 isoform X1 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_1740.1_01801.t1 | gi|641767036|ref|XP_008168260.1| | PREDICTED: calpain-6 isoform X2 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_1740.1_01801.t1 | gi|657593502|ref|XP_008301326.1| | PREDICTED: calpain-5-like, partial [Stegastes partitus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1740.1_01801.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1740.1_01801.t1 atgatttccgggctttttgactctgccacaccttacaatggtcagaaatacagtcatttgaagaaagagtgtgtttcaca aggaaggctttttgaagacccagaatttcctcccactagtaaatctttgttctacagccagagggcgccatcatacatcc agtggaagagaccaggggacatagttgctgatccaaagtttttcgatgaaggtgctagtgccgatgatttttcccagggt tccctcggtaactgctggtttgtcgctgcttgttcgtgtattgctgaagataaaaaactgctgaaaaagattgttcctga tatggaggaacaggagtggtcgaaggacaacaaatatgccggcatttttcacttccgtttttggcagctaggagagtggg ttgacgtagtaatagacgattacttaccagtggataatagcggtaatctggtgtatgtacagtctaaagctaaaaatgaa ttctggtctgcgctgctagagaaggcttatgctaaattatttggtgactacgagtcgttaaagggaggccaagctaagga cgccatggtcgatatgacaggaggtgtcggggaaggcttcgagcttgctgatgtctgtaaatcggatgaagataaaaata aactgttcaagattctaaagaaatccaaggagcatcattcattgatcagtgcttctataaggtataagtttgatgtagat gatgctgaggtcgaggtgatgatatcactagagcaatgggatggcagaattaacagggacaaaggacgggacaatgaaac cattggcttctgtgttatgaagacagacagaaacagaaagtaccggatgcacgacaccttggagaaagtccaaaccacat cgtacagtaactcccgtaatcagtttgtacgcctcacactgacggagggacgatactgtatcataccaacgacctttgaa cctaatgttcaatgtaaatttcttctccgagtttacggcaattctgaccctagtctcaaagaattatacctagatgaacc cccgccaccagattctggtatttttggtattggagcgaagaaacccaaagtagcagccactcagataaccgtcatcagag ccgagggactggaagtacaggacagggacggctggtcatcgtgggtacggaatacctacaacaaagtcaggaactgggcc aaagacaaagtggactatgccaccggctatgtaaagggtgccagagaaatggccaaagcttacaa |
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Protein
| Protein ID | pfu_aug2.0_1740.1_01801.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1740.1_01801.t1 MISGLFDSATPYNGQKYSHLKKECVSQGRLFEDPEFPPTSKSLFYSQRAPSYIQWKRPGDIVADPKFFDEGASADDFSQG SLGNCWFVAACSCIAEDKKLLKKIVPDMEEQEWSKDNKYAGIFHFRFWQLGEWVDVVIDDYLPVDNSGNLVYVQSKAKNE FWSALLEKAYAKLFGDYESLKGGQAKDAMVDMTGGVGEGFELADVCKSDEDKNKLFKILKKSKEHHSLISASIRYKFDVD DAEVEVMISLEQWDGRINRDKGRDNETIGFCVMKTDRNRKYRMHDTLEKVQTTSYSNSRNQFVRLTLTEGRYCIIPTTFE PNVQCKFLLRVYGNSDPSLKELYLDEPPPPDSGIFGIGAKKPKVAATQITVIRAEGLEVQDRDGWSSWVRNTYNKVRNWA KDKVDYATGYVKGAREMAKAY |
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