Gene
| Gene Model ID | pfu_aug2.0_1740.1_01802 |
|---|---|
| Locus | scaffold1740.1 : 22866 ... 25095 : + |
| To GenomeBrowser | scaffold1740.1:22866..25095 |
| Genes list of scaffold | scaffold1740.1 |
| Synonym | pfu_aug1.0_396.1_65392 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1740.1_01802.t1 | 4 | 1 | Kelch_3 | 62 | 72 | 3.3e-14 | 52.5 | 0.94 | 1700.0 | -0.7 |
| pfu_aug2.0_1740.1_01802.t1 | 6 | 1 | Kelch_2 | 63 | 70 | 9.1e-07 | 28.4 | 7.9 | 15000.0 | -4.0 |
| pfu_aug2.0_1740.1_01802.t1 | 6 | 1 | Kelch_6 | 63 | 90 | 4.5e-12 | 45.5 | 0.65 | 1200.0 | -0.1 |
| pfu_aug2.0_1740.1_01802.t1 | 5 | 1 | Kelch_5 | 113 | 147 | 8.4e-15 | 54.3 | 2.1e-07 | 0.00039 | 20.2 |
| pfu_aug2.0_1740.1_01802.t1 | 6 | 2 | Kelch_2 | 114 | 132 | 9.1e-07 | 28.4 | 2.4e-05 | 0.044 | 13.5 |
| pfu_aug2.0_1740.1_01802.t1 | 6 | 2 | Kelch_6 | 115 | 142 | 4.5e-12 | 45.5 | 2.7e-05 | 0.05 | 13.8 |
| pfu_aug2.0_1740.1_01802.t1 | 5 | 1 | Kelch_1 | 115 | 135 | 1.3e-07 | 30.9 | 0.00018 | 0.34 | 10.4 |
| pfu_aug2.0_1740.1_01802.t1 | 5 | 1 | Kelch_4 | 118 | 160 | 5.8e-13 | 48.3 | 2.9e-05 | 0.053 | 13.2 |
| pfu_aug2.0_1740.1_01802.t1 | 4 | 2 | Kelch_3 | 124 | 189 | 3.3e-14 | 52.5 | 1.2e-07 | 0.00023 | 21.2 |
| pfu_aug2.0_1740.1_01802.t1 | 5 | 2 | Kelch_5 | 178 | 206 | 8.4e-15 | 54.3 | 1.2e-06 | 0.0022 | 17.8 |
| pfu_aug2.0_1740.1_01802.t1 | 5 | 2 | Kelch_4 | 181 | 243 | 5.8e-13 | 48.3 | 2.7e-08 | 5.0e-05 | 22.9 |
| pfu_aug2.0_1740.1_01802.t1 | 6 | 3 | Kelch_6 | 181 | 248 | 4.5e-12 | 45.5 | 0.00044 | 0.81 | 9.9 |
| pfu_aug2.0_1740.1_01802.t1 | 4 | 3 | Kelch_3 | 193 | 254 | 3.3e-14 | 52.5 | 7.9e-08 | 0.00015 | 21.8 |
| pfu_aug2.0_1740.1_01802.t1 | 6 | 3 | Kelch_2 | 218 | 241 | 9.1e-07 | 28.4 | 0.012 | 22.0 | 5.0 |
| pfu_aug2.0_1740.1_01802.t1 | 5 | 2 | Kelch_1 | 224 | 241 | 1.3e-07 | 30.9 | 0.0032 | 6.0 | 6.5 |
| pfu_aug2.0_1740.1_01802.t1 | 5 | 3 | Kelch_1 | 247 | 255 | 1.3e-07 | 30.9 | 0.39 | 720.0 | -0.2 |
| pfu_aug2.0_1740.1_01802.t1 | 6 | 4 | Kelch_2 | 247 | 270 | 9.1e-07 | 28.4 | 1.1 | 2000.0 | -1.3 |
| pfu_aug2.0_1740.1_01802.t1 | 5 | 3 | Kelch_4 | 247 | 272 | 5.8e-13 | 48.3 | 0.063 | 120.0 | 2.6 |
| pfu_aug2.0_1740.1_01802.t1 | 6 | 4 | Kelch_6 | 247 | 272 | 4.5e-12 | 45.5 | 0.66 | 1200.0 | -0.1 |
| pfu_aug2.0_1740.1_01802.t1 | 5 | 3 | Kelch_5 | 248 | 272 | 8.4e-15 | 54.3 | 1.2 | 2200.0 | -1.3 |
| pfu_aug2.0_1740.1_01802.t1 | 5 | 4 | Kelch_5 | 315 | 357 | 8.4e-15 | 54.3 | 8.3e-05 | 0.15 | 12.0 |
| pfu_aug2.0_1740.1_01802.t1 | 5 | 4 | Kelch_1 | 316 | 335 | 1.3e-07 | 30.9 | 6.1e-05 | 0.11 | 12.0 |
| pfu_aug2.0_1740.1_01802.t1 | 5 | 4 | Kelch_4 | 316 | 333 | 5.8e-13 | 48.3 | 0.011 | 20.0 | 5.0 |
| pfu_aug2.0_1740.1_01802.t1 | 6 | 5 | Kelch_6 | 316 | 363 | 4.5e-12 | 45.5 | 2.3e-06 | 0.0042 | 17.1 |
| pfu_aug2.0_1740.1_01802.t1 | 6 | 5 | Kelch_2 | 318 | 336 | 9.1e-07 | 28.4 | 0.0098 | 18.0 | 5.2 |
| pfu_aug2.0_1740.1_01802.t1 | 4 | 4 | Kelch_3 | 324 | 363 | 3.3e-14 | 52.5 | 0.05 | 92.0 | 3.3 |
| pfu_aug2.0_1740.1_01802.t1 | 6 | 6 | Kelch_6 | 372 | 395 | 4.5e-12 | 45.5 | 0.63 | 1200.0 | -0.1 |
| pfu_aug2.0_1740.1_01802.t1 | 6 | 6 | Kelch_2 | 373 | 391 | 9.1e-07 | 28.4 | 0.066 | 120.0 | 2.6 |
| pfu_aug2.0_1740.1_01802.t1 | 5 | 5 | Kelch_5 | 373 | 390 | 8.4e-15 | 54.3 | 0.96 | 1800.0 | -1.0 |
| pfu_aug2.0_1740.1_01802.t1 | 5 | 5 | Kelch_4 | 373 | 390 | 5.8e-13 | 48.3 | 0.14 | 260.0 | 1.4 |
| pfu_aug2.0_1740.1_01802.t1 | 5 | 5 | Kelch_1 | 381 | 399 | 1.3e-07 | 30.9 | 0.61 | 1100.0 | -0.8 |
| pfu_aug2.0_1740.1_01802.t1 | 1 | 1 | PHD | 413 | 461 | 7.6e-08 | 31.9 | 1.0e-10 | 1.9e-07 | 30.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1740.1_01802.t1 | gi|74136763|ref|NP_001028184.1| | recombination activating protein 2-like [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_1740.1_01802.t1 | gi|19075851|ref|NP_588351.1| | cell end marker Tea1 [Schizosaccharomyces pombe 972h-] | 3.0e-06 |
| pfu_aug2.0_1740.1_01802.t1 | gi|219129593|ref|XP_002184969.1| | predicted protein [Phaeodactylum tricornutum CCAP 1055/1] | 3.0e-06 |
| pfu_aug2.0_1740.1_01802.t1 | gi|294953443|ref|XP_002787766.1| | hypothetical protein Pmar_PMAR012543 [Perkinsus marinus ATCC 50983] | 7.0e-06 |
| pfu_aug2.0_1740.1_01802.t1 | gi|312077965|ref|XP_003141532.1| | hypothetical protein LOAG_05947 [Loa loa] | 7.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_1740.1_01802.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1740.1_01802.t1 atggaggaaaatacgacacggagctatcgttttttgccgtttaaatcggcaaatcagctgacggggaaagcgacaaggaa gaagacagatcttctgttgaagaattttgatttttttccaccagaggggcatacagtggtggaaatacgggagtcggagg tggctgacagtgcttcttctcgttgtaaatttgtttattttggcggatcaaggagaaccaaagaagctcaatggccttat gccaaagagattttgacttatgattttgaagttgaaaatgatgatgttaacatcatttcatgtaagcaaggcaccacctc tgggtccgaatttccaccactgcatgcctcctctgcgtgttcaatcagtaacaaaatatatgtgtggggaggattaaata ctcatacaatgaaaactattgatgagctctatatcctacaaagtgttggcaatgaatatggttcaaaatggcaaatcagc cttgtacaatctgaaccaagccaacttagtccttccaaacaaacaggacaaatcccctcgccaagggctggtcataaaat tgttgctctctctgacaatttgtttcttttgtttggtggcctctcttttgacagacaggattcctctggtaaagatatgg taggcctattttctcaggtttgcaaagatggttctttttatgtttttaacacagaaactttaacatggtcaattctgtca aatgttccagatatcactccaagatgttaccatgctatggtatgctgggtaagtaatttgtgtacatatgttttgataaa tggaggtataacataccaagaccgtataccaaaagagaggctaccaattaatgaatttattattttgaaatttgaattat ccacatttgattattctatcagcaaacttgtgattccaatgggtgaaaatcatgttcgttacatatcttatcatgctgcc atacattttaatgacaaaatctacattctgggtggcaatcatcagcattcagccattatcaatgacactcctcttcttaa tgacaaaatgtttgtgtgtgatttgagtagcaagtcttatgaagcaattgatgttccagcatcatatattacatcaggtc attctttggtctcattatcagatgattgtattttgtcaacaggaggcatacttgattctatgtttgtttatacaacaaaa ctgatgcagccatcaccatgtgatttattacaagaatgtaagatttccaattcacctgaagtaagcccaataggatggat tcaatgcgaggctgcttgtaagagatggctgcatcagttttgtgtaaatctacttgacaaagctttgcctagaggcaaat atgtctgtgcatcatgcaaatcatctcaaaagacaaagaaaagaaaacactaa |
|
Protein
| Protein ID | pfu_aug2.0_1740.1_01802.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1740.1_01802.t1 MEENTTRSYRFLPFKSANQLTGKATRKKTDLLLKNFDFFPPEGHTVVEIRESEVADSASSRCKFVYFGGSRRTKEAQWPY AKEILTYDFEVENDDVNIISCKQGTTSGSEFPPLHASSACSISNKIYVWGGLNTHTMKTIDELYILQSVGNEYGSKWQIS LVQSEPSQLSPSKQTGQIPSPRAGHKIVALSDNLFLLFGGLSFDRQDSSGKDMVGLFSQVCKDGSFYVFNTETLTWSILS NVPDITPRCYHAMVCWVSNLCTYVLINGGITYQDRIPKERLPINEFIILKFELSTFDYSISKLVIPMGENHVRYISYHAA IHFNDKIYILGGNHQHSAIINDTPLLNDKMFVCDLSSKSYEAIDVPASYITSGHSLVSLSDDCILSTGGILDSMFVYTTK LMQPSPCDLLQECKISNSPEVSPIGWIQCEAACKRWLHQFCVNLLDKALPRGKYVCASCKSSQKTKKRKH |
|