Gene
| Gene Model ID | pfu_aug2.0_1740.1_01805 |
|---|---|
| Locus | scaffold1740.1 : 106716 ... 116929 : + |
| To GenomeBrowser | scaffold1740.1:106716..116929 |
| Genes list of scaffold | scaffold1740.1 |
| Synonym | pfu_aug1.0_396.1_65387 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1740.1_01805.t1 | 1 | 1 | BRE | 3 | 292 | 0.0 | 286.9 | 0.0 | 0.0 | 286.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1740.1_01805.t1 | gi|676491913|ref|XP_009065749.1| | hypothetical protein LOTGIDRAFT_236527 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1740.1_01805.t1 | gi|390359223|ref|XP_796419.3| | PREDICTED: BRCA1-A complex subunit BRE [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_1740.1_01805.t1 | gi|657736920|ref|XP_008320616.1| | PREDICTED: BRCA1-A complex subunit BRE [Cynoglossus semilaevis] | 0.0 |
| pfu_aug2.0_1740.1_01805.t1 | gi|617371738|ref|XP_007575468.1| | PREDICTED: BRCA1-A complex subunit BRE [Poecilia formosa] | 0.0 |
| pfu_aug2.0_1740.1_01805.t1 | gi|551495213|ref|XP_005799169.1| | PREDICTED: BRCA1-A complex subunit BRE-like [Xiphophorus maculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1740.1_01805.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1740.1_01805.t1 atggtgggatgtgtgacagtgaccaaattcccgtgtggagacagatttaaactgaacataccttatgcagggattactct gacatgggaggtgttgtttgacaataatttcccggaggatccacctgattttattttcagcaccgaggatgaggacttca gccctgatattcaggatatcaagagtttacgtgactgggatcacacggatccagcagcattaaccagtgtagtagaagag ctgctgcagctctatagggactaccagctcagacagatagaagcttactccaggctgaccctgcagctcaactccatgtt agaggatcaaagtaccacaaaaatagataatcaggatgtggagatattcctttatatagcagagacaaagttaggacctg ttaatttcttgataaagttacctgtggattatacccaaattccagcttatgttaccaaggataatccaggcacagacaca tctgtattattgctaaccctcccacacccagacagtgccaggattacaccacagttatacctctcacccagagtggagca tgctttaggtggatcaagttcacttaggatcccagctttccccaatggaggcctgatgggagattatgttgttggaatat cacaactacttcaaaacaaagttgatcaaattgtacagaattttgacagaaggagagattatatggcagcattattatca tactttggaaggtcagttctggaatttgatgctgacacattcagaaaaatatcattgctgttcgaatggaatgatttctt ctttatactgcacattgaagtaccacaatttttccctcaagagaagcccatcttaagttttcaatccatctatcatgagt gcaaaggaaagccatacactgaagttcatgaagagtatccatacagccctaggtggtccggtagtgaaatggcagagaga gcaagggtatacatcttggacaacattaaagacttccaaatacagtccgttagaagtggagttttatga |
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Protein
| Protein ID | pfu_aug2.0_1740.1_01805.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1740.1_01805.t1 MVGCVTVTKFPCGDRFKLNIPYAGITLTWEVLFDNNFPEDPPDFIFSTEDEDFSPDIQDIKSLRDWDHTDPAALTSVVEE LLQLYRDYQLRQIEAYSRLTLQLNSMLEDQSTTKIDNQDVEIFLYIAETKLGPVNFLIKLPVDYTQIPAYVTKDNPGTDT SVLLLTLPHPDSARITPQLYLSPRVEHALGGSSSLRIPAFPNGGLMGDYVVGISQLLQNKVDQIVQNFDRRRDYMAALLS YFGRSVLEFDADTFRKISLLFEWNDFFFILHIEVPQFFPQEKPILSFQSIYHECKGKPYTEVHEEYPYSPRWSGSEMAER ARVYILDNIKDFQIQSVRSGVL |
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