Gene
| Gene Model ID | pfu_aug2.0_1746.1_21771 |
|---|---|
| Locus | scaffold1746.1 : 15886 ... 33499 : + |
| To GenomeBrowser | scaffold1746.1:15886..33499 |
| Genes list of scaffold | scaffold1746.1 |
| Synonym | pfu_aug1.0_13840.1_10655 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1746.1_21771.t1 | 3 | 1 | Sushi | 147 | 169 | 1.9e-11 | 44.1 | 0.42 | 1600.0 | -0.5 |
| pfu_aug2.0_1746.1_21771.t1 | 3 | 2 | Sushi | 229 | 283 | 1.9e-11 | 44.1 | 5.1e-15 | 1.9e-11 | 44.1 |
| pfu_aug2.0_1746.1_21771.t1 | 4 | 1 | EGF | 255 | 260 | 1.5e-06 | 28.0 | 1.9 | 7000.0 | -2.9 |
| pfu_aug2.0_1746.1_21771.t1 | 4 | 2 | EGF | 270 | 283 | 1.5e-06 | 28.0 | 2.0 | 7500.0 | -3.0 |
| pfu_aug2.0_1746.1_21771.t1 | 4 | 3 | EGF | 289 | 319 | 1.5e-06 | 28.0 | 4.1e-10 | 1.5e-06 | 28.0 |
| pfu_aug2.0_1746.1_21771.t1 | 3 | 3 | Sushi | 445 | 463 | 1.9e-11 | 44.1 | 0.36 | 1300.0 | -0.3 |
| pfu_aug2.0_1746.1_21771.t1 | 4 | 4 | EGF | 513 | 529 | 1.5e-06 | 28.0 | 0.95 | 3500.0 | -2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1746.1_21771.t1 | gi|589960674|ref|XP_006992913.1| | PREDICTED: fibulin-7-like, partial [Peromyscus maniculatus bairdii] | 3.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_1746.1_21771.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1746.1_21771.t1 atgacaattgatacgtcaattttgtgcagtcctcacactagttgtaaagatctcaaatttgaggtgacaatatcaacggg aacagacatccagccccctgttgtagagaactgtcccacacacattataagaaagacggctgaacataccctgtggataa actggacagcgccattattctatgaccctcttggaacagatatagatatttcaacgaactatccatcggccgaatggaca ttttactggggagatttcccggtccagtattctgctgtaaaaccagaacagaatgcacgaacagaatgcacctttaatat ttccgtgcgacctcatctgtgtgaacgtctcagtgtcccttctcatggagctgttgtatgtaatggatggaagaaggatt atggggagttttgtatacagttttgtggctataaccgcacagtcagtcagcagtacgatcttagacagtggtatgtatgt ggtgctagcggagcgtggattgcagcaggacctccacccaactgtacagatcatataactactcagatggaccttcagga agtatcccatctccacttccattcatgtctcgattctaacaccattagaaacacttacattgatgtccttcaaacatcaa actataagtacttttgtgatgagcacgaagatgaataaattacatgtggtgaccctggagatgtacccaacagtgttagg agtggtacatcgtacacttacaacagcgtggtgtcatacacctgtaatcctggttacaatatgacatcaggtgacagcaa tctgcagtgttcctctactggaatatggtccggcgtcaaaccaacatgcaaatttgtgaatacatgtaacagcaatccat gccagaacggaggaacatgtataaatggcgtagaacagtacacatgtgtgtgcaactcaagttttgggggtataaactgt gaagaagacatccaaccccctgttgtagagaactgtcccacacacattataagaaatacggctgaacataccatgtggat aaactggacagcgccattattctatgaccctcttggaactgatatagacatttcaacgaactatccttcggccgaatgga cattttactggggagatttcccggtccagtattctgctcttaaaccatcaaatggattacgaacagaatgcacctttaat atttccgttcgacctcatccctgtgagcgtctcagtatcccgtctcatggagctgttgtatgtaatggttggaagaagga ttatggggagttttgtatacagttttgtggctataaccgcacagtcagtcagcagtacgatcttagacagtggtatgtat gtggtgctagcggagcgtggatagcagcaggacctccacccaactgtacagatcatataactactcagatggaccttcag gaagtgtcccatctccacttccattcatgtctcgattccaacaccattaggaatacttatattgatgtccttcaaacatc aaactataattacttttgtgaagagcatgaaggtgaatgtaaggctgagaatgttgacattaactgcttgtga |
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Protein
| Protein ID | pfu_aug2.0_1746.1_21771.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1746.1_21771.t1 MTIDTSILCSPHTSCKDLKFEVTISTGTDIQPPVVENCPTHIIRKTAEHTLWINWTAPLFYDPLGTDIDISTNYPSAEWT FYWGDFPVQYSAVKPEQNARTECTFNISVRPHLCERLSVPSHGAVVCNGWKKDYGEFCIQFCGYNRTVSQQYDLRQWYVC GASGAWIAAGPPPNCTDHITTQMDLQEVSHLHFHSCLDSNTIRNTYIDVLQTSNYKYFCDEHEDEXITCGDPGDVPNSVR SGTSYTYNSVVSYTCNPGYNMTSGDSNLQCSSTGIWSGVKPTCKFVNTCNSNPCQNGGTCINGVEQYTCVCNSSFGGINC EEDIQPPVVENCPTHIIRNTAEHTMWINWTAPLFYDPLGTDIDISTNYPSAEWTFYWGDFPVQYSALKPSNGLRTECTFN ISVRPHPCERLSIPSHGAVVCNGWKKDYGEFCIQFCGYNRTVSQQYDLRQWYVCGASGAWIAAGPPPNCTDHITTQMDLQ EVSHLHFHSCLDSNTIRNTYIDVLQTSNYNYFCEEHEGECKAENVDINCL |
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