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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1746.1_21773
Locus scaffold1746.1 : 110411 ... 111475 : -
To GenomeBrowser scaffold1746.1:110411..111475
Genes list of scaffold scaffold1746.1
Synonym pfu_aug1.0_8955.1_60527

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1746.1_21773.t1 gi|676426764|ref|XP_009044728.1| hypothetical protein LOTGIDRAFT_170653 [Lottia gigantea] 0.0
pfu_aug2.0_1746.1_21773.t1 gi|524870461|ref|XP_005092015.1| PREDICTED: flocculation protein FLO11-like [Aplysia californica] 0.0
pfu_aug2.0_1746.1_21773.t1 gi|524992126|ref|XP_005043918.1| PREDICTED: sterile alpha motif domain-containing protein 3 [Ficedula albicollis] 4.0e-14
pfu_aug2.0_1746.1_21773.t1 gi|699642099|ref|XP_009878461.1| PREDICTED: sterile alpha motif domain-containing protein 3 [Charadrius vociferus] 4.0e-13
pfu_aug2.0_1746.1_21773.t1 gi|700380926|ref|XP_009930274.1| PREDICTED: sterile alpha motif domain-containing protein 3 [Opisthocomus hoazin] 6.0e-13

Transcript
Transcript IDpfu_aug2.0_1746.1_21773.t1
Definition-
>pfu_aug2.0_1746.1_21773.t1
atgatgactgccgaggttgtaccaagttcgtcagtggcggtagcaaaagaagtagcaaagtctgagatggcatgctcacc
agagaaaaagatcaaattgtcagaggagtctaaaggcagcacaagtggtgttcctacggaagataatacagaagaggaaa
ttcaaaagtatatggaacaaacatttgagattcgaaggactttcataactgaagaaatgcctgcaattttactactgaaa
gagacttatcccctattgttcaaagggagacaaatgcttgcagaatttcaacgtattacaactctggacattgatcatat
gatccaagagtattgtgtgaaatatgcctctataataattgacatagcaaagcatacgagtggttcaaatccgatactga
gacaagctgagagtattaagcagcagaaccaagctttgaagcagtactgggacatggtgacggctttatgtctgataccc
atgttactgaaggagaatctggtggagatggtacgcgagataggagaagatgatgaagttgacccaaaaggaaaaatcgt
ccctatccttatttctaaaggaacaattttcaaaagtgatgaatttatcttagtggttgaggaagaggttgttcaagaat
ttgaggaatttacaatagcactagctacattattttctgcttattgggtatttaacatgcagtatcctcgcacactgaac
aacacatataactttattcagaaggctatacttcaccacagagatggcactcccctccctccactttgtaagcagctgat
acagcgtctacagaaagctggagcatcaagttccagtcgagctcgtatgtcgtag

Protein
Protein IDpfu_aug2.0_1746.1_21773.t1
Definition-
>pfu_aug2.0_1746.1_21773.t1
MMTAEVVPSSSVAVAKEVAKSEMACSPEKKIKLSEESKGSTSGVPTEDNTEEEIQKYMEQTFEIRRTFITEEMPAILLLK
ETYPLLFKGRQMLAEFQRITTLDIDHMIQEYCVKYASIIIDIAKHTSGSNPILRQAESIKQQNQALKQYWDMVTALCLIP
MLLKENLVEMVREIGEDDEVDPKGKIVPILISKGTIFKSDEFILVVEEEVVQEFEEFTIALATLFSAYWVFNMQYPRTLN
NTYNFIQKAILHHRDGTPLPPLCKQLIQRLQKAGASSSSRARMS

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