Gene
| Gene Model ID | pfu_aug2.0_1749.1_31885 |
|---|---|
| Locus | scaffold1749.1 : 109963 ... 126155 : - |
| To GenomeBrowser | scaffold1749.1:109963..126155 |
| Genes list of scaffold | scaffold1749.1 |
| Synonym | pfu_aug1.0_3979.1_37760 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1749.1_31885.t1 | 6 | 1 | SRCR | 28 | 78 | 0.0 | 214.6 | 9.1e-05 | 0.34 | 11.2 |
| pfu_aug2.0_1749.1_31885.t1 | 6 | 2 | SRCR | 98 | 173 | 0.0 | 214.6 | 1.6e-09 | 6.0e-06 | 26.5 |
| pfu_aug2.0_1749.1_31885.t1 | 5 | 1 | SRCR_2 | 123 | 134 | 7.3e-11 | 42.1 | 1.1 | 4200.0 | -2.0 |
| pfu_aug2.0_1749.1_31885.t1 | 6 | 3 | SRCR | 192 | 295 | 0.0 | 214.6 | 9.8e-16 | 3.7e-12 | 46.4 |
| pfu_aug2.0_1749.1_31885.t1 | 5 | 2 | SRCR_2 | 199 | 229 | 7.3e-11 | 42.1 | 0.0039 | 14.0 | 5.9 |
| pfu_aug2.0_1749.1_31885.t1 | 6 | 4 | SRCR | 309 | 414 | 0.0 | 214.6 | 2.0e-17 | 7.4e-14 | 51.8 |
| pfu_aug2.0_1749.1_31885.t1 | 5 | 3 | SRCR_2 | 315 | 348 | 7.3e-11 | 42.1 | 0.00043 | 1.6 | 9.0 |
| pfu_aug2.0_1749.1_31885.t1 | 6 | 5 | SRCR | 428 | 525 | 0.0 | 214.6 | 6.4e-15 | 2.4e-11 | 43.8 |
| pfu_aug2.0_1749.1_31885.t1 | 5 | 4 | SRCR_2 | 434 | 468 | 7.3e-11 | 42.1 | 0.00021 | 0.76 | 10.0 |
| pfu_aug2.0_1749.1_31885.t1 | 6 | 6 | SRCR | 540 | 637 | 0.0 | 214.6 | 1.6e-12 | 5.8e-09 | 36.1 |
| pfu_aug2.0_1749.1_31885.t1 | 5 | 5 | SRCR_2 | 555 | 584 | 7.3e-11 | 42.1 | 4.2e-06 | 0.016 | 15.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1749.1_31885.t1 | gi|390366572|ref|XP_780926.3| | 0.0 | |
| pfu_aug2.0_1749.1_31885.t1 | gi|390370398|ref|XP_001186143.2| | 2.99878e-43 |
Transcript
| Transcript ID | pfu_aug2.0_1749.1_31885.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1749.1_31885.t1 atggaaaacttcaattctctattagtccaattgatatattgttttgatagatatggaggcaatatgtacaatgcatggga tacgtactatgcagctcgtacagacgtaggaccaataatggtgactggtttaaaatgccctcctaacgccactgactatg ggcaatgttcacacaatggcttcggcaatctttgttgtggatgtaaccacagttatgacttggctattaggtgtcacgaa agaccagttggagaggataatcaggcaatacgactgtccggatatgggagaaacgataaaggtcgtgttgagatctggca taatggaagttggatactcgtcgatccttactggctccagtttcctgaagctaacatgttctgcaaaatgctgggattca gacatggcggggagcctattttgaacgaaacagttccagcaacgaaagggatagttctaattcagtatatagactgtcct tctgttgctgtccacattaacaattgctcggtgacgtatagcacaagggcgaggatgacaattccaaccataccattccg aaaagcgcggaataaccaaggagtagagaagttacagtactataaagacggttattgggggacagtatgtggagcctaca tagggaaaccagaggcctccatgatctgtcatatgatgggattcaaacatggtggagcgctgataaagtcttacaaggac tggtcttacaaaggattaggtcccattcttttgaagtatttggactgtccaatgaatgcaactaatatatcccagtgtcc gttcagaaattacacagactacagtcatcggtcagcgtgttattcctacattgaccataagaaggacgtcagtatttctt gtaacaagaatccagtcgagcaacaagatatcccggtcagactgaatggttccagtgcaaacgatgggattttagaggtc tatcataacaacagatggaagtttgtctcgtacagaggagaccctaaactggcatctgtggtgtgtcgtcaacttggatt cagacatggtggagcgctgataaagtcttacaaggactggtcttacaaaggattaggtcccattcttttgaagtatttgg actgtccaatgaatgcaactaatatatcccagtgtccgttcagaaattacacagactacagtcatcggtcagcgtgttat tcctacattgaccataagaaggacgtcagtatttcttgtaacaagaatccagtcgagcaacaagatatcccggtcagact gaatggttccagtgcaaacgatgggattttagaggtctatcataacaacagatggaagtttgtctcgtacagaggagacc ctaaactggcatctgtggtgtgtcgtcaacttggattcaggtctggtggcgaaatgtacaagagctacatatgtttagaa ggttattgtgacgtttcggagtcattgtccggctacacagaatgtacgggtaaagaggatagtctcgcacaatgtgaagg acttcaatggacaacgtactggcccttatatggacgtccaaccggaatccgttgttatggagactatagaccatttgaag tgaagcagacattaaataagactcacgagggagagatcaagttgaccaaagatggagaagattataagatatgcgctaca ctgtgggacgacatccatgctagggcagtctgcaaatctttgggctacagtgatggaagtgccaagtatatccgggccac acggtatgtaagatacagtggtgagaagatgataggtacaatgtactgtggacgcggagcagataacatgtatcaatgct ttcattcagggtggaactcttacgataaggaatgcttcaatgcccttcctcttactgcggctgtaaagtgtattttataa |
|
Protein
| Protein ID | pfu_aug2.0_1749.1_31885.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1749.1_31885.t1 MENFNSLLVQLIYCFDRYGGNMYNAWDTYYAARTDVGPIMVTGLKCPPNATDYGQCSHNGFGNLCCGCNHSYDLAIRCHE RPVGEDNQAIRLSGYGRNDKGRVEIWHNGSWILVDPYWLQFPEANMFCKMLGFRHGGEPILNETVPATKGIVLIQYIDCP SVAVHINNCSVTYSTRARMTIPTIPFRKARNNQGVEKLQYYKDGYWGTVCGAYIGKPEASMICHMMGFKHGGALIKSYKD WSYKGLGPILLKYLDCPMNATNISQCPFRNYTDYSHRSACYSYIDHKKDVSISCNKNPVEQQDIPVRLNGSSANDGILEV YHNNRWKFVSYRGDPKLASVVCRQLGFRHGGALIKSYKDWSYKGLGPILLKYLDCPMNATNISQCPFRNYTDYSHRSACY SYIDHKKDVSISCNKNPVEQQDIPVRLNGSSANDGILEVYHNNRWKFVSYRGDPKLASVVCRQLGFRSGGEMYKSYICLE GYCDVSESLSGYTECTGKEDSLAQCEGLQWTTYWPLYGRPTGIRCYGDYRPFEVKQTLNKTHEGEIKLTKDGEDYKICAT LWDDIHARAVCKSLGYSDGSAKYIRATRYVRYSGEKMIGTMYCGRGADNMYQCFHSGWNSYDKECFNALPLTAAVKCIL |
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