Gene
| Gene Model ID | pfu_aug2.0_175.1_17056 |
|---|---|
| Locus | scaffold175.1 : 17353 ... 19445 : - |
| To GenomeBrowser | scaffold175.1:17353..19445 |
| Genes list of scaffold | scaffold175.1 |
| Synonym | pfu_aug1.0_6906.1_17009 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| PREDICTED: angiopoietin-4 [Ictidomys tridecemlineatus] | GO:0044707 GO:0044763 GO:0048522 GO:0051179 GO:0051239 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_175.1_17056.t1 | 1 | 1 | Fibrinogen_C | 1 | 100 | 4.4e-25 | 88.6 | 3.5e-29 | 5.3e-25 | 88.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_175.1_17056.t1 | gi|532069713|ref|XP_005320691.1| | PREDICTED: angiopoietin-4 [Ictidomys tridecemlineatus] | 3.0e-25 |
| pfu_aug2.0_175.1_17056.t1 | gi|260814482|ref|XP_002601944.1| | hypothetical protein BRAFLDRAFT_86428 [Branchiostoma floridae] | 5.0e-25 |
| pfu_aug2.0_175.1_17056.t1 | gi|591372096|ref|XP_007060753.1| | PREDICTED: angiopoietin-2-like [Chelonia mydas] | 6.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_175.1_17056.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_175.1_17056.t1 atggagacagaaggcggaggatggacggttgtaatgaaaagatttgatggatctgtcgacttcaatcagaattggaataa gtacaagtatggatttggcagtgccagtggcgaatattggctgggcaatgagtacttccatatcttgacgtggagaagta attacggaacatacttcaagttacagtcctgggaaagaaagtggtactgggcctggtacgcttggttatacctttattcc gaaaatgacggatacaagatacgatttggtggatataaaggaaatgctggtaggaggttacacgtcttctaa |
|
Protein
| Protein ID | pfu_aug2.0_175.1_17056.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_175.1_17056.t1 METEGGGWTVVMKRFDGSVDFNQNWNKYKYGFGSASGEYWLGNEYFHILTWRSNYGTYFKLQSWERKWYWAWYAWLYLYS ENDGYKIRFGGYKGNAGRRLHVF |
|