Gene
| Gene Model ID | pfu_aug2.0_175.1_17057 |
|---|---|
| Locus | scaffold175.1 : 41327 ... 69005 : - |
| To GenomeBrowser | scaffold175.1:41327..69005 |
| Genes list of scaffold | scaffold175.1 |
| Synonym | pfu_aug1.0_45181.1_48583 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_175.1_17057.t1 | 2 | 1 | C2 | 19 | 105 | 6.7e-25 | 86.7 | 6.1e-16 | 4.5e-12 | 45.6 |
| pfu_aug2.0_175.1_17057.t1 | 2 | 2 | C2 | 150 | 227 | 6.7e-25 | 86.7 | 5.2e-14 | 3.8e-10 | 39.4 |
| pfu_aug2.0_175.1_17057.t1 | 2 | 1 | Copine | 296 | 349 | 2.1e-18 | 66.4 | 3.9e-19 | 2.9e-15 | 56.2 |
| pfu_aug2.0_175.1_17057.t1 | 2 | 2 | Copine | 349 | 362 | 2.1e-18 | 66.4 | 3.2e-05 | 0.24 | 11.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_175.1_17057.t1 | gi|637273492|ref|XP_008103759.1| | PREDICTED: copine-9 isoform X2 [Anolis carolinensis] | 0.0 |
| pfu_aug2.0_175.1_17057.t1 | gi|583974778|ref|XP_006782771.1| | PREDICTED: copine-8-like [Neolamprologus brichardi] | 0.0 |
| pfu_aug2.0_175.1_17057.t1 | gi|115842306|ref|XP_790964.2| | PREDICTED: copine-8 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_175.1_17057.t1 | gi|676467923|ref|XP_009058045.1| | hypothetical protein LOTGIDRAFT_228802 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_175.1_17057.t1 | gi|585659528|ref|XP_006816205.1| | PREDICTED: copine-8-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_175.1_17057.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_175.1_17057.t1 atggctttccaaccaggaacagcatcagccccttcctcagaagtagaagtcagtgtttcatgcaggaatcttcaagatag agataccctttccaagtctgatccaatttgtgttgtcttaactcgggatactcgtagtggaaattatcatgagtttggaa gaactgagatgataaaagacacactgaacccagactttgtgaaaaaattcaatatgaagtacttttttgaggaaagtcaa aaactacgctttgaaatctatgatgtggattctcctagtcagaaacttgaatcacatgacttcttggggcgaattgactg tacactgggagagattgttggtgcctcaagtggtaaaatggaacgcaagctagaaggtgttcataaaggacagatcacag tgagaacggaagaagttagtagcaataaggaaattgtgactttgcatttctctgccacaaaactggacaagaaagatttt cttggaaaatcagatcctttcttgattttctacagagcaaatgaagatagaagctacacagttacacataagacagaggt gataaagaacacattaaatccgacatggaggccatttacagtaccagtcaaaactttatgtaatggggattacaataggt caatcaaggtggaatgttttgattgggacagtgatggaagcacattctacatacaactacatgtaataaatccaaagaaa aaggcaaagaaaaagagctacaaaaactctgggcaggtgcaattaatgaagtgcaaagtagagatacagccatcattctt agattatttgaaaggagggacacaattgaattttacagtagctatagattttactgcatcgaatgggaatccttcaaact ccaactccttacactatataagtccatatggtcccaaccagtatgtaatggccatacaggctgtaggggagattatacag gactatgatagtgacaaattatttcctgtacttggatttggagctaaacttcaggatggatcagtatcacatgaatttcc tttggcttcaaatttacctatgtcaataattattgttggagttggtaatgcagagtttgatgactttgtgcatgataaag atgatttaacgtgttatttcctatgtgtacagcgaaaacgcaaaagcaataatttttgttttgtgccattccgtgagttc ctgggtggaggaggtgggaacagtaatattgctcaagcagccctggccaaggaagtgttagccgagataccagaccaaat tatacaatatatgaaagctaacaacatagctcctaaaccccctaaagctaacgtcaccgtaccaggaaataatcctaacc aaggtgtacaaggaccaggtcctaaccaaggtggtcctatggggcaattaccaccacaaggacaaaatgtaggtggacct gccccatcattggccccacagcaacgaggtacagctccatatcctggatctggtcctacagccccgcagggcaatgctcc ctcttaccctggttcagctccctcagctccccatggcagtgctccgccttaccctggagggtcaggttcttcaccctatc ctgcacaaactaaccaatcatggggtggtatgcctcccccacctaatgttcatagatga |
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Protein
| Protein ID | pfu_aug2.0_175.1_17057.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_175.1_17057.t1 MAFQPGTASAPSSEVEVSVSCRNLQDRDTLSKSDPICVVLTRDTRSGNYHEFGRTEMIKDTLNPDFVKKFNMKYFFEESQ KLRFEIYDVDSPSQKLESHDFLGRIDCTLGEIVGASSGKMERKLEGVHKGQITVRTEEVSSNKEIVTLHFSATKLDKKDF LGKSDPFLIFYRANEDRSYTVTHKTEVIKNTLNPTWRPFTVPVKTLCNGDYNRSIKVECFDWDSDGSTFYIQLHVINPKK KAKKKSYKNSGQVQLMKCKVEIQPSFLDYLKGGTQLNFTVAIDFTASNGNPSNSNSLHYISPYGPNQYVMAIQAVGEIIQ DYDSDKLFPVLGFGAKLQDGSVSHEFPLASNLPMSIIIVGVGNAEFDDFVHDKDDLTCYFLCVQRKRKSNNFCFVPFREF LGGGGGNSNIAQAALAKEVLAEIPDQIIQYMKANNIAPKPPKANVTVPGNNPNQGVQGPGPNQGGPMGQLPPQGQNVGGP APSLAPQQRGTAPYPGSGPTAPQGNAPSYPGSAPSAPHGSAPPYPGGSGSSPYPAQTNQSWGGMPPPPNVHR |
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