Gene
| Gene Model ID | pfu_aug2.0_175.1_17061 |
|---|---|
| Locus | scaffold175.1 : 221955 ... 241596 : - |
| To GenomeBrowser | scaffold175.1:221955..241596 |
| Genes list of scaffold | scaffold175.1 |
| Synonym | pfu_aug1.0_4960.1_30827 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_175.1_17061.t1 | 4 | 1 | cNMP_binding | 274 | 360 | 6.7e-13 | 48.2 | 2.7e-12 | 2.0e-08 | 33.9 |
| pfu_aug2.0_175.1_17061.t1 | 4 | 2 | cNMP_binding | 407 | 438 | 6.7e-13 | 48.2 | 0.0019 | 14.0 | 5.5 |
| pfu_aug2.0_175.1_17061.t1 | 4 | 3 | cNMP_binding | 616 | 667 | 6.7e-13 | 48.2 | 0.0062 | 46.0 | 3.9 |
| pfu_aug2.0_175.1_17061.t1 | 4 | 4 | cNMP_binding | 696 | 716 | 6.7e-13 | 48.2 | 0.82 | 6100.0 | -2.9 |
Transcript
| Transcript ID | pfu_aug2.0_175.1_17061.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_175.1_17061.t1 atgggaaatatggatgtaaaaaatgatggaaataaacggaaggttacctttggtgcagtgtcggagagcggacgaccatc ttccagaggcaaccagaagcgcgtgtcatttggtgacgtcagcgagggaatcagccaaagtcgcagatctagctcacccg gcacccaactagccaaattcaaaactgttgccaaatttgctctcataggagccaaaatacgtcaccactctgaaggtcag gtgtcgttagtacgtcagccagaattatcagagaaagacttgataatgaaccagaagtccgcaggtcgtcgaggtacggt ccatggcagtcagatgtacatggtgacggacggactgtcaaccaggcgacgaacggacgaaaatgtcggcaggataggat ctgcaaatatcaataatattataaaccaagctaaaactagacaggaagctgaaagactaaaacgtttacaaagattgaag atgtggattagagttgtaggaaggtgctgtaatctacagtctcgtatcatacacagaaattctcttgatcctgtatatgt gaagcaaatggaaaacatcggtaaaacatctcctctggaaaaagattcatacggatctaacagaatcgacctatcttact tcaaagccaatactcagatgcgtatgtcacaacgagccgtcagcattctaacgaagcctccggagctgcgcacgcacgag gagataaaatacgccatgaatgcgctttgtaatgtccattttatatcaaagttcccgttgaagatccagaaggagttagc tacacacggctatgtagagtgttacgaggctaaacgttttattttacgtcaaggtggcgctccggagaacgcttatattg tcctgtacggatcaatacttactgccttattggatgagcacaaattgtcagcgacttctgtggacagtcttatcacacgt ggtcaacagtttggtgagattggaatatacagaaacaaaccaaggggtggatccaatataacagctgagtacacagaggt cctccgaatcccgggtgatgaattcaaacgcatattcatgggtgctgcagttgatccagagaatgatcctttcttaaaaa aattcaaatttctaaaaaattggcctctgaaagaactacggggagatccaaacaagtacattactactttctatcagaga aacatagcgctcacatcaaacagcaacagaagtccatggatttatatagtgaaggagggttctctacgcatcatgaaaag actggaaaaggttgtcccgacggtgaacaagaagacgggccatttcaatgaggaggcgcatcaaagcggatatctatcgt ttctcacgcgagacttggactatgaccgttatgcaaattaccattccataagtcttcccccacctctacagtacaacgac aatgatttgaatacatcttgtgactctcagtcaagcaacgaattatcagagtcttaccataacctaagtgttcaggctct tccactacttcatagacttgagaacgttctgaggccccacacagcaggtgctttcttaacaacgcccgtcagaaaaaccc caaaatccaagaagagaacatccaagtctgctcacccttcccaaacagaagtgccaaagataaaaccgtcatcatcgtct ccagatgataacgccactgatcaacaggaaaaagaaaatcaaaatattcccaaagatgatggaaagaaaaccatcgccaa gagaaccatatatgatgactttgatttggtagacaatgataaggagcacgtggttacagcggcagagagaaatccccagt gggtccatgtacagacactcacaaaagaccaagtctttggtctgcagtacgttgtattcgacaaaagtaagcaacctcag ccaagttttgtggtaataagtaacggagcagaggtcgtccagatagacaaacagctcttcctatccaaacttgacatgaa tgcaagggagaaactgcgaagcgagggtctgcagtacgttgtattcgacaaaagtaagcaacctcagccaagttttgtgg taataagtaacggagcagaggtcgtccagatagacaaacagctcttcctatccaaacttgacatgaatgcaagggagaaa ctgcgaagcgagatttcaccatatcccacggatgaagaactacaagcaaagcttgtgaccagaatcaactgggaatcata caaagacattgtgttggatcaagttgcacacgaacgacaaaaactttatccgaatcgtctgaagacatgtggtacatata gacttaagtctgcgaatgttgttacacaatctgaaggcaaagaatcttccatttatcctagtcaggactacaacgcaaat aaaaaaaaggaagaaaactgtcgtcttgaattatatttaatttccttttacatcatgtttgcactatttattaatgtaat aaagtaa |
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Protein
| Protein ID | pfu_aug2.0_175.1_17061.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_175.1_17061.t1 MGNMDVKNDGNKRKVTFGAVSESGRPSSRGNQKRVSFGDVSEGISQSRRSSSPGTQLAKFKTVAKFALIGAKIRHHSEGQ VSLVRQPELSEKDLIMNQKSAGRRGTVHGSQMYMVTDGLSTRRRTDENVGRIGSANINNIINQAKTRQEAERLKRLQRLK MWIRVVGRCCNLQSRIIHRNSLDPVYVKQMENIGKTSPLEKDSYGSNRIDLSYFKANTQMRMSQRAVSILTKPPELRTHE EIKYAMNALCNVHFISKFPLKIQKELATHGYVECYEAKRFILRQGGAPENAYIVLYGSILTALLDEHKLSATSVDSLITR GQQFGEIGIYRNKPRGGSNITAEYTEVLRIPGDEFKRIFMGAAVDPENDPFLKKFKFLKNWPLKELRGDPNKYITTFYQR NIALTSNSNRSPWIYIVKEGSLRIMKRLEKVVPTVNKKTGHFNEEAHQSGYLSFLTRDLDYDRYANYHSISLPPPLQYND NDLNTSCDSQSSNELSESYHNLSVQALPLLHRLENVLRPHTAGAFLTTPVRKTPKSKKRTSKSAHPSQTEVPKIKPSSSS PDDNATDQQEKENQNIPKDDGKKTIAKRTIYDDFDLVDNDKEHVVTAAERNPQWVHVQTLTKDQVFGLQYVVFDKSKQPQ PSFVVISNGAEVVQIDKQLFLSKLDMNAREKLRSEGLQYVVFDKSKQPQPSFVVISNGAEVVQIDKQLFLSKLDMNAREK LRSEISPYPTDEELQAKLVTRINWESYKDIVLDQVAHERQKLYPNRLKTCGTYRLKSANVVTQSEGKESSIYPSQDYNAN KKKEENCRLELYLISFYIMFALFINVIK |
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