Gene
| Gene Model ID | pfu_aug2.0_175.1_17063 |
|---|---|
| Locus | scaffold175.1 : 269291 ... 278816 : - |
| To GenomeBrowser | scaffold175.1:269291..278816 |
| Genes list of scaffold | scaffold175.1 |
| Synonym | pfu_aug1.0_37013.1_41024 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| adp-ribosylation factor 5 | GO:0003924 GO:0005154 GO:0005525 GO:0005794 GO:0005829 GO:0006471 GO:0007264 GO:0015031 GO:0016192 GO:0016477 GO:0031584 GO:0032587 GO:0043066 GO:0045944 GO:0048471 GO:0070062 GO:2000377 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_175.1_17063.t1 | 1 | 1 | Arf | 8 | 176 | 0.0 | 257.4 | 0.0 | 0.0 | 257.2 |
| pfu_aug2.0_175.1_17063.t1 | 2 | 1 | G-alpha | 15 | 39 | 2.4e-11 | 42.9 | 0.00042 | 0.56 | 8.8 |
| pfu_aug2.0_175.1_17063.t1 | 1 | 1 | SRPRB | 16 | 143 | 8.1e-14 | 51.2 | 7.5e-17 | 1.0e-13 | 50.9 |
| pfu_aug2.0_175.1_17063.t1 | 1 | 1 | Gtr1_RagA | 19 | 146 | 9.4e-13 | 47.8 | 8.2e-16 | 1.1e-12 | 47.6 |
| pfu_aug2.0_175.1_17063.t1 | 1 | 1 | Miro | 19 | 129 | 1.4e-08 | 35.2 | 1.3e-11 | 1.8e-08 | 34.8 |
| pfu_aug2.0_175.1_17063.t1 | 1 | 1 | Ras | 20 | 165 | 1.3e-13 | 50.6 | 1.1e-16 | 1.4e-13 | 50.5 |
| pfu_aug2.0_175.1_17063.t1 | 1 | 1 | MMR_HSR1 | 20 | 127 | 4.3e-06 | 26.6 | 4.4e-09 | 5.9e-06 | 26.2 |
| pfu_aug2.0_175.1_17063.t1 | 2 | 2 | G-alpha | 45 | 130 | 2.4e-11 | 42.9 | 1.6e-11 | 2.2e-08 | 33.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_175.1_17063.t1 | gi|57525748|ref|NP_001003590.1| | uncharacterized protein LOC445196 [Danio rerio] | 0.0 |
| pfu_aug2.0_175.1_17063.t1 | gi|53130690|emb|CAG31674.1| | hypothetical protein RCJMB04_9i5 [Gallus gallus] | 0.0 |
| pfu_aug2.0_175.1_17063.t1 | gi|504165054|ref|XP_004592558.1| | PREDICTED: ADP-ribosylation factor 5 [Ochotona princeps] | 0.0 |
| pfu_aug2.0_175.1_17063.t1 | gi|558132808|ref|XP_006090553.1| | PREDICTED: ADP-ribosylation factor 5 isoform X1 [Myotis lucifugus] | 0.0 |
| pfu_aug2.0_175.1_17063.t1 | gi|4502209|ref|NP_001653.1| | ADP-ribosylation factor 5 [Homo sapiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_175.1_17063.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_175.1_17063.t1 atgggtttgactatatccggccttttcactcggctgttcggcaaaaagcaaatgaggattcttatggtgggacttgatgc agcaggaaagacaactattttgtacaaattgaaattaggagaaatagtaactacaattcccactataggtttcaatgtag aaactgtagaatacaagaatattagcttcacagtatgggatgtaggtggtcaggataaaatccgtcccttatggagacat tacttccagaacacacaggggctgatatttgtgattgacagcaatgacagagaaagagcagaagaagctaaggatgaact aagtaaaatgctccaggaggacgagttgagagatgcaaaattattagtgtttgccaataaacaggatctgcctaatgcca tgccagcagctgaaattacagaaaaattgggacttcaatgcctaagaaacagaacatggtatatccaagctgcgtgtgcc acacaaggtacaggactttatgaaggattagactggttatcagcagagttggctaaatag |
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Protein
| Protein ID | pfu_aug2.0_175.1_17063.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_175.1_17063.t1 MGLTISGLFTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRH YFQNTQGLIFVIDSNDRERAEEAKDELSKMLQEDELRDAKLLVFANKQDLPNAMPAAEITEKLGLQCLRNRTWYIQAACA TQGTGLYEGLDWLSAELAK |
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