Gene
| Gene Model ID | pfu_aug2.0_175.1_17068 |
|---|---|
| Locus | scaffold175.1 : 341364 ... 352829 : - |
| To GenomeBrowser | scaffold175.1:341364..352829 |
| Genes list of scaffold | scaffold175.1 |
| Synonym | pfu_aug1.0_1368.1_58464 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_175.1_17068.t2 | 2 | 1 | PDZ | 132 | 205 | 1.4e-24 | 86.0 | 5.2e-18 | 2.5e-14 | 53.1 |
| pfu_aug2.0_175.1_17068.t2 | 2 | 1 | PDZ_2 | 152 | 190 | 1.3e-16 | 60.1 | 1.5e-10 | 7.5e-07 | 28.9 |
| pfu_aug2.0_175.1_17068.t2 | 2 | 2 | PDZ_2 | 268 | 315 | 1.3e-16 | 60.1 | 2.9e-10 | 1.4e-06 | 28.0 |
| pfu_aug2.0_175.1_17068.t2 | 2 | 2 | PDZ | 272 | 324 | 1.4e-24 | 86.0 | 7.1e-11 | 3.5e-07 | 30.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_175.1_17068.t2 | gi|585701977|ref|XP_002739893.2| | PREDICTED: uncharacterized protein LOC100375241 [Saccoglossus kowalevskii] | 1.0e-11 |
| pfu_aug2.0_175.1_17068.t2 | gi|350404682|ref|XP_003487185.1| | 2.0e-10 | |
| pfu_aug2.0_175.1_17068.t2 | gi|340721003|ref|XP_003398917.1| | 2.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_175.1_17068.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_175.1_17068.t1 atggccgatactcagagaggaagggtcatgtttggccatcttgcacaagaactgctgacggacacggaacttttgaaatt caaacaagctctgaaccaatttcggatttcgagatccgttacaacattatgtcaacagttgcgacctttgataaacacta cagagaagatgctattattgatagaactgagctcaagaataccaaaatcactacaggaggactttcatcgactatgcagt atgcagtacaataactatgaaacatatctcagactttacagcaatgggaataacccagtcacagattcatccaaagtcat tgctcaagacccatcagggaagttccaaatcgtctctcgtggaagttctcttcatggaacaagtgttacaagtggaatat acagcgaaaacgacgatctgacgtcattgaaacagttggacacggttgacggagattcggacgtgttcgtctggacgccg caatatggaagaatcgatgctagtcattctgcctttgtgtcaaaagataatataaaaacgaccggaatcaaacggatttt tatagaaaggagagatgatggaagtctgggactcggaataattggtggcaaagagtatggtacggatattacggtgaatg tagtggatccggacggaccggccgcagaacagggtctgcagccaggggataaaattctggaggtgaacgggaccgtcttc tcccacatgacgcacgctgaggcagtccaactcatgaggaacgcgtggaacgtcatcatgatggtccaatcaccttcaag tgccaaaaatggtagagtagataatgtacgaatacgagaaatagagctgattgtgtacccaaccattgacggacggctag gcatatcgaccaacaggcaaaacaagataaagtatctactagtaaaggaagtagagaaacattcaccggcctacaaagct ggaattctggtcggggattatataactaggattgacggagtggacataagaaagctgacggagcgacaaatcacgtctct aacgagatctaaacgtcttacattgtgggcaaagagatttgtacgagatgatggtagtgggaactttgtacctgtataca gtaataatacagtgctaaaaggttttagtccccagttctcctcttctccaagaacaaagaaatcccctgccaattttgac aatcttgatgacaatattctgaatgatttcaatggtctggatgttaatgacaatccaaatgatgaatcctacccagaagg gatgatcaacgacaccattgcgcatgtgtacagaaatcctcaacctcagcacatcataatcagaaatggtagcacagaaa atgtgcagcagcaccacagaagacccagtatccatgacagcacaaacaattggctactctctccccagggtcaggcagcg aagaaatattttcaaaccaaaagttacattactgcacctaatctcccgccaccacggagtcactcggctgacgccgtagt ttcgaattctcattttgagcgcagaggacgacacacacaccgtgatcagtcaccaaacgtgtggggaagcggtgtcagac gatacgtaaggagcaggtcccagtcccccaaccccctgatgcggagtcaggggcggatgtcaaggagggaccgcgatgtt atggctgcaattcaacttggaatggagaagagacaaagagcattgcgactgtcattataccaaccacagaactctagcat ggaactggatctggaaatgtag |
|
| Transcript ID | pfu_aug2.0_175.1_17068.t2 |
| Definition | - |
>pfu_aug2.0_175.1_17068.t2 atgctattattgatagaactgagctcaagaataccaaaatcactacaggaggactttcatcgactatgcagtatgcagta caataactatgaaacatatctcagactttacagcaatgggaataacccagtcacagattcatccaaagtcattgctcaag acccatcagggaagttccaaatcgtctctcgtggaagttctcttcatggaacaagtgttacaagtggaatatacagcgaa aacgacgatctgacgtcattgaaacagttggacacggttgacggagattcggacgtgttcgtctggacgccgcaatatgg aagaatcgatgctagtcattctgcctttgtgtcaaaagataatataaaaacgaccggaatcaaacggatttttatagaaa ggagagatgatggaagtctgggactcggaataattggtggcaaagagtatggtacggatattacggtgaatgtagtggat ccggacggaccggccgcagaacagggtctgcagccaggggataaaattctggaggtgaacgggaccgtcttctcccacat gacgcacgctgaggcagtccaactcatgaggaacgcgtggaacgtcatcatgatggtccaatcaccttcaagtgccaaaa atggtagagtagataatgtacgaatacgagaaatagagctgattgtgtacccaaccattgacggacggctaggcatatcg accaacagtgaggaatatgtgtccaattctcttccaaggcaacaggctagatttgtaagtatgatcttaccaagagagat agaattcgatatgcaaaacaagataaagtatctactagtaaaggaagtagagaaacattcaccggcctacaaagctggaa ttctggtcggggattatataactaggattgacggagtggacataagaaagctgacggagcgacaaatcacgtctctaacg agatctaaacgtcttacattgtgggcaaagagatttgtacgagatgatggtagtgggaactttgtacctgtatacagtaa taatacagtgctaaaaggttttagtccccagttctcctcttctccaagaacaaagaaatcccctgccaattttgacaatc ttgatgacaatattctgaatgatttcaatggtctggatgttaatgacaatccaaatgatgaatcctacccagaagggatg atcaacgacaccattgcgcatgtgtacagaaatcctcaacctcagcacatcataatcagaaatggtagcacagaaaatgt gcagcagcaccacagaagacccagtatccatgacagcacaaacaattggctactctctccccagggtcaggcagcgaaga aatattttcaaaccaaaagttacattactgcacctaatctcccgccaccacggagtcactcggctgacgccgtagtttcg aattctcattttgagcgcagaggacgacacacacaccgtgatcagtcaccaaacgtgtggggaagcggtgtcagacgata cgtaaggagcaggtcccagtcccccaaccccctgatgcggagtcaggggcggatgtcaaggagggaccgcgatgttatgg ctgcaattcaacttggaatggagaagagacaaagagcattgcgactgtcattataccaaccacagaactctagcatggaa ctggatctggaaatgtag |
|
Protein
| Protein ID | pfu_aug2.0_175.1_17068.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_175.1_17068.t1 MADTQRGRVMFGHLAQELLTDTELLKFKQALNQFRISRSVTTLCQQLRPLINTTEKMLLLIELSSRIPKSLQEDFHRLCS MQYNNYETYLRLYSNGNNPVTDSSKVIAQDPSGKFQIVSRGSSLHGTSVTSGIYSENDDLTSLKQLDTVDGDSDVFVWTP QYGRIDASHSAFVSKDNIKTTGIKRIFIERRDDGSLGLGIIGGKEYGTDITVNVVDPDGPAAEQGLQPGDKILEVNGTVF SHMTHAEAVQLMRNAWNVIMMVQSPSSAKNGRVDNVRIREIELIVYPTIDGRLGISTNRQNKIKYLLVKEVEKHSPAYKA GILVGDYITRIDGVDIRKLTERQITSLTRSKRLTLWAKRFVRDDGSGNFVPVYSNNTVLKGFSPQFSSSPRTKKSPANFD NLDDNILNDFNGLDVNDNPNDESYPEGMINDTIAHVYRNPQPQHIIIRNGSTENVQQHHRRPSIHDSTNNWLLSPQGQAA KKYFQTKSYITAPNLPPPRSHSADAVVSNSHFERRGRHTHRDQSPNVWGSGVRRYVRSRSQSPNPLMRSQGRMSRRDRDV MAAIQLGMEKRQRALRLSLYQPQNSSMELDLEM |
|
| Protein ID | pfu_aug2.0_175.1_17068.t2 |
| Definition | - |
>pfu_aug2.0_175.1_17068.t2 MLLLIELSSRIPKSLQEDFHRLCSMQYNNYETYLRLYSNGNNPVTDSSKVIAQDPSGKFQIVSRGSSLHGTSVTSGIYSE NDDLTSLKQLDTVDGDSDVFVWTPQYGRIDASHSAFVSKDNIKTTGIKRIFIERRDDGSLGLGIIGGKEYGTDITVNVVD PDGPAAEQGLQPGDKILEVNGTVFSHMTHAEAVQLMRNAWNVIMMVQSPSSAKNGRVDNVRIREIELIVYPTIDGRLGIS TNSEEYVSNSLPRQQARFVSMILPREIEFDMQNKIKYLLVKEVEKHSPAYKAGILVGDYITRIDGVDIRKLTERQITSLT RSKRLTLWAKRFVRDDGSGNFVPVYSNNTVLKGFSPQFSSSPRTKKSPANFDNLDDNILNDFNGLDVNDNPNDESYPEGM INDTIAHVYRNPQPQHIIIRNGSTENVQQHHRRPSIHDSTNNWLLSPQGQAAKKYFQTKSYITAPNLPPPRSHSADAVVS NSHFERRGRHTHRDQSPNVWGSGVRRYVRSRSQSPNPLMRSQGRMSRRDRDVMAAIQLGMEKRQRALRLSLYQPQNSSME LDLEM |
|