Gene
| Gene Model ID | pfu_aug2.0_175.1_17072 |
|---|---|
| Locus | scaffold175.1 : 418800 ... 427530 : + |
| To GenomeBrowser | scaffold175.1:418800..427530 |
| Genes list of scaffold | scaffold175.1 |
| Synonym | pfu_aug1.0_87.1_21977 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_175.1_17072.t1 | 2 | 1 | BicD | 15 | 70 | 0.0 | 682.4 | 0.31 | 930.0 | -2.2 |
| pfu_aug2.0_175.1_17072.t1 | 2 | 2 | BicD | 78 | 769 | 0.0 | 682.4 | 0.0 | 0.0 | 682.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_175.1_17072.t1 | gi|524908659|ref|XP_005109422.1| | PREDICTED: protein bicaudal D homolog 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_175.1_17072.t1 | gi|676430017|ref|XP_009045789.1| | hypothetical protein LOTGIDRAFT_52363, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_175.1_17072.t1 | gi|507561520|ref|XP_004664459.1| | PREDICTED: protein bicaudal D homolog 1 isoform X2 [Jaculus jaculus] | 0.0 |
| pfu_aug2.0_175.1_17072.t1 | gi|532043741|ref|XP_005364691.1| | PREDICTED: protein bicaudal D homolog 1 isoform X2 [Microtus ochrogaster] | 0.0 |
| pfu_aug2.0_175.1_17072.t1 | gi|731225551|ref|XP_010626827.1| | PREDICTED: protein bicaudal D homolog 1 isoform X5 [Fukomys damarensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_175.1_17072.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_175.1_17072.t1 atgtcagacccaacaagcggtacacaatctgtcgacgatctgcgtcgggaaatagagaggttacagacagagttagcgga aacttctcaagagaaggtgcaggccgcagagtacggacttgcagttcttgaggaaaaacaacagcttcagcagcagatcg acgaacttgaagtacaattagatacagttaaacaagagttagaatgtgccaaagaggcccttaacaagcatcaggacacc tttcgtaagcagcagaaaagtggaatacatcatgaggacaccttccttcaggaagctgcttcaagggaagaaagttataa gtccatcatcacagaaaatgaatcagaactgaaaatgtgcaggcaggcactcgaaagaatcagtgccgaaaacgaacgtc tgaacgctgccgttcatgaacttcaacaacacaatgaccaactggaagatcagagacgtcagtacaaaaatgaaatcaga gagtttaaagtgagggaaaacagaaacttagccgattatacagaacttgaagacgaaaatataggcctgcagaagacggt ttcccaactcaaacaaagccaagttgagtttgaggggatgaaacatgaaattaaacgtctgcaagaggacgcagacgacc tcaacattcaacttgaagacgctttaaatttgaagaaaattgtggacaaaaattacgaagaggcaattactgcacttcag catgagcgcgaacagaaacatgccttaaagaaagaacttgaccagcggctgacgcaggagtcgatgtttaatcttagtaa cctcgcacactacggtggactaacagacgcaatgcctcaggcaaacaatggggtcggccaagattcaggggacgagggag atgaaaataaccctgctctacggagggtagaagcagatttcaaacacgatgaaacaaaatctccggtcaaaccaggtcca ggaaaagttaatgacattcttagtgaaattcaagagaatgaggtgaaaaaattggaacaattgcttgagcagagtgaaca tgaaaaatccgaacttcagtgtgctctagatgaagcacaaaagcttattgaagaaactcagaaggaccttgttgaacaga agaaacgtgcagatcagcttaaagcgcatatctcgtctgtgttaacttctgaagaatctcaattagcagatatgaacgat gacgatgagaaaatcgacaagttaattgaaaatgaaaacgatcctgacaaaagagctctattagaacttaggaaaaatct caggtcaaacgagaagaaatactcaactgcattgaaagaaattagcaatttacataatgaaatcagtcgtctgcaagaaa aaagtcacggaaaaactggtgataaggaaatcgatgatgcattagatgacttgaaaaagaaatgcaataattatgaaaat gttattaaagaattagagaaggacttgaaagctatgaccttggctgctggagaggcacaaggcggactcactacaactca ggatgagttagtgcgagttaccgaggaattggctcaactttatcacttagtgtgcgaggtgaatggagaaacgccgagcc gtgttatgctggaccatgtcaaggccgcaacacagctctcaaggacagagagggagagcagtgaggagaaagacagcgac aaatcggaaaaagctggggacgaatcagagaaaccaaagactcccaagtccaaaaaatccaaatcaaaatccagtaaaga ggtgtcaaataacgatattaaaggagacccgatctcatgctacaaacttacggaaacaatcatagatcaagtgaaatatt tacgacgcgccgtggaacacttgatggaagtgtcgcgaaacacgactgatgacaatgaaaatgctgatgtgcaggaattg caagaacagatagtgaaactcaaagcaatgttgtccactaaacgcgaacagatcgcaacgttgcgcagtgttctcaaagc gaataaatcgacggccgaaatcgctctagccaatttaaaacagaagtatgagaacgagaaagttatagtcaccgagacta tgatgaagttgagaaacgaactgaaggcgctgaaggaagatgccgcaacgtttgcatctctcagagccatgtttgcgcaa cgttgcgatgaatatgtgactcaacttgacgagcaacagcgtcaacttatcagtgcagaggaggaaaagaaaactctgaa ctccttactcaggatggccatccaacaaaagctgaccttgactcagcggttggaggatcttgaatttgaccgcgagagga ggaacatgaggcgccaaggaggaggaggcggcggaggagggggaggaagaaataagatgggggcttccaaagtaagtcac aactacaactctaatccatatcatgaggattatggtcgccatgggtcgggcaggtcccactattacaaccgcagggacta ttag |
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Protein
| Protein ID | pfu_aug2.0_175.1_17072.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_175.1_17072.t1 MSDPTSGTQSVDDLRREIERLQTELAETSQEKVQAAEYGLAVLEEKQQLQQQIDELEVQLDTVKQELECAKEALNKHQDT FRKQQKSGIHHEDTFLQEAASREESYKSIITENESELKMCRQALERISAENERLNAAVHELQQHNDQLEDQRRQYKNEIR EFKVRENRNLADYTELEDENIGLQKTVSQLKQSQVEFEGMKHEIKRLQEDADDLNIQLEDALNLKKIVDKNYEEAITALQ HEREQKHALKKELDQRLTQESMFNLSNLAHYGGLTDAMPQANNGVGQDSGDEGDENNPALRRVEADFKHDETKSPVKPGP GKVNDILSEIQENEVKKLEQLLEQSEHEKSELQCALDEAQKLIEETQKDLVEQKKRADQLKAHISSVLTSEESQLADMND DDEKIDKLIENENDPDKRALLELRKNLRSNEKKYSTALKEISNLHNEISRLQEKSHGKTGDKEIDDALDDLKKKCNNYEN VIKELEKDLKAMTLAAGEAQGGLTTTQDELVRVTEELAQLYHLVCEVNGETPSRVMLDHVKAATQLSRTERESSEEKDSD KSEKAGDESEKPKTPKSKKSKSKSSKEVSNNDIKGDPISCYKLTETIIDQVKYLRRAVEHLMEVSRNTTDDNENADVQEL QEQIVKLKAMLSTKREQIATLRSVLKANKSTAEIALANLKQKYENEKVIVTETMMKLRNELKALKEDAATFASLRAMFAQ RCDEYVTQLDEQQRQLISAEEEKKTLNSLLRMAIQQKLTLTQRLEDLEFDRERRNMRRQGGGGGGGGGGRNKMGASKVSH NYNSNPYHEDYGRHGSGRSHYYNRRDY |
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