Gene
| Gene Model ID | pfu_aug2.0_1750.1_01808 |
|---|---|
| Locus | scaffold1750.1 : 28166 ... 40652 : + |
| To GenomeBrowser | scaffold1750.1:28166..40652 |
| Genes list of scaffold | scaffold1750.1 |
| Synonym | pfu_aug1.0_10772.1_53586 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ribosomal protein s6 kinase beta-1-like | GO:0004711 GO:0005524 GO:0005634 GO:0005737 GO:0006468 GO:0035556 GO:0045948 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1750.1_01808.t1 | 1 | 1 | Pkinase | 2 | 216 | 0.0 | 214.1 | 0.0 | 0.0 | 213.6 |
| pfu_aug2.0_1750.1_01808.t1 | 1 | 1 | Pkinase_Tyr | 7 | 214 | 6.4e-31 | 107.3 | 4.0e-34 | 8.5e-31 | 106.9 |
| pfu_aug2.0_1750.1_01808.t1 | 1 | 1 | Kinase-like | 84 | 214 | 2.2e-06 | 26.8 | 1.5e-09 | 3.2e-06 | 26.3 |
| pfu_aug2.0_1750.1_01808.t1 | 1 | 1 | Pkinase_C | 227 | 270 | 2.4e-09 | 37.5 | 3.4e-12 | 7.2e-09 | 36.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1750.1_01808.t1 | gi|676495552|ref|XP_009066929.1| | hypothetical protein LOTGIDRAFT_134650 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1750.1_01808.t1 | gi|597737729|ref|XP_007231097.1| | PREDICTED: ribosomal protein S6 kinase beta-1 isoform X2 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_1750.1_01808.t1 | gi|432900014|ref|XP_004076682.1| | PREDICTED: ribosomal protein S6 kinase beta-1-like [Oryzias latipes] | 0.0 |
| pfu_aug2.0_1750.1_01808.t1 | gi|597737727|ref|XP_007231096.1| | PREDICTED: ribosomal protein S6 kinase beta-1 isoform X1 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_1750.1_01808.t1 | gi|591365662|ref|XP_007057696.1| | PREDICTED: ribosomal protein S6 kinase beta-1 isoform X1 [Chelonia mydas] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1750.1_01808.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1750.1_01808.t1 atgaaagttttgaaaaaggccacaatagctagaaatgccaaagatacagctcacaccaaggcagagagaaatattctgga aggtgttaagcatccgttcattgttgatttgatatatgcattccaaacagggggtaagctttacttaatactggagtatc tccccgggggcgagctttttatgcagcttgagagggaaggaattttcatggaggacacagcatgtttttatttagcagaa atcacaatggcaatagaacatttacactcacagggaattatttacagagatctgaaaccggaaaatatcctcctagataa ctcaggtcacgtgaagttgacagactttggtttatgtaaggagtccattagtgaagggggactgacacataccttctgtg gtactatagaatacatggcccctgaaattttgacaaggagtggtcacggtaaagcagtagactggtggagtttgggagca ttgatgtatgatatgttaacgggagccccaccattcacagctgagaacagaaagaaaacaattgacaaaatattaaaagc caaacttagtttacctccatatttgaccaacgaagccagaggacttatcaaaaagttactgaagaagtctccacaagaga ggctaggaggggcagcagatgatgccaaacccattaagacaagtgaggaggatgtaagtcagtttgacactaagtttaca cgacagacccctgtagactccccagacgatactgtcctcagtgaaagtgccaacagagtgttcctaggatttacatatgt agctccctcagttttggatgagctgaacaacaagccgtggatagagaaggagccccgatcaccacgtaaacctggattca ggggggctatgagtccacatcagagtagtctggtagagggtttccgagtggctggtcacataaatggaacggaagaaatg gaagccatggacacgacaacgatggttataccaaaacgatctacatcccccgcaatcgccaccaaaaatactgccttcaa acaagctgccttccctggtagtcaaaatagacccccacatctacgcatgaattga |
|
Protein
| Protein ID | pfu_aug2.0_1750.1_01808.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1750.1_01808.t1 MKVLKKATIARNAKDTAHTKAERNILEGVKHPFIVDLIYAFQTGGKLYLILEYLPGGELFMQLEREGIFMEDTACFYLAE ITMAIEHLHSQGIIYRDLKPENILLDNSGHVKLTDFGLCKESISEGGLTHTFCGTIEYMAPEILTRSGHGKAVDWWSLGA LMYDMLTGAPPFTAENRKKTIDKILKAKLSLPPYLTNEARGLIKKLLKKSPQERLGGAADDAKPIKTSEEDVSQFDTKFT RQTPVDSPDDTVLSESANRVFLGFTYVAPSVLDELNNKPWIEKEPRSPRKPGFRGAMSPHQSSLVEGFRVAGHINGTEEM EAMDTTTMVIPKRSTSPAIATKNTAFKQAAFPGSQNRPPHLRMN |
|