Gene
| Gene Model ID | pfu_aug2.0_1752.1_08559 |
|---|---|
| Locus | scaffold1752.1 : 83096 ... 91375 : + |
| To GenomeBrowser | scaffold1752.1:83096..91375 |
| Genes list of scaffold | scaffold1752.1 |
| Synonym | pfu_aug1.0_9137.1_53289 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1752.1_08559.t1 | 7 | 1 | LRR_6 | 18 | 37 | 1.1e-13 | 49.6 | 4.4e-05 | 0.16 | 12.1 |
| pfu_aug2.0_1752.1_08559.t1 | 6 | 1 | LRR_1 | 18 | 30 | 7.2e-06 | 25.3 | 0.68 | 2500.0 | -0.7 |
| pfu_aug2.0_1752.1_08559.t1 | 7 | 2 | LRR_6 | 46 | 65 | 1.1e-13 | 49.6 | 0.0035 | 13.0 | 6.2 |
| pfu_aug2.0_1752.1_08559.t1 | 6 | 2 | LRR_1 | 48 | 57 | 7.2e-06 | 25.3 | 0.026 | 97.0 | 3.6 |
| pfu_aug2.0_1752.1_08559.t1 | 7 | 3 | LRR_6 | 71 | 91 | 1.1e-13 | 49.6 | 7.9e-05 | 0.29 | 11.3 |
| pfu_aug2.0_1752.1_08559.t1 | 6 | 3 | LRR_1 | 74 | 86 | 7.2e-06 | 25.3 | 0.0034 | 13.0 | 6.3 |
| pfu_aug2.0_1752.1_08559.t1 | 7 | 4 | LRR_6 | 100 | 119 | 1.1e-13 | 49.6 | 0.00029 | 1.1 | 9.5 |
| pfu_aug2.0_1752.1_08559.t1 | 6 | 4 | LRR_1 | 102 | 113 | 7.2e-06 | 25.3 | 0.14 | 510.0 | 1.4 |
| pfu_aug2.0_1752.1_08559.t1 | 7 | 5 | LRR_6 | 127 | 140 | 1.1e-13 | 49.6 | 0.00041 | 1.5 | 9.0 |
| pfu_aug2.0_1752.1_08559.t1 | 6 | 5 | LRR_1 | 130 | 148 | 7.2e-06 | 25.3 | 0.00039 | 1.5 | 9.1 |
| pfu_aug2.0_1752.1_08559.t1 | 7 | 6 | LRR_6 | 155 | 176 | 1.1e-13 | 49.6 | 7.2e-05 | 0.27 | 11.4 |
| pfu_aug2.0_1752.1_08559.t1 | 6 | 6 | LRR_1 | 157 | 170 | 7.2e-06 | 25.3 | 0.072 | 270.0 | 2.2 |
| pfu_aug2.0_1752.1_08559.t1 | 7 | 7 | LRR_6 | 185 | 194 | 1.1e-13 | 49.6 | 4.0 | 15000.0 | -3.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1752.1_08559.t1 | gi|676448835|ref|XP_009051858.1| | hypothetical protein LOTGIDRAFT_114931, partial [Lottia gigantea] | 5.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_1752.1_08559.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1752.1_08559.t1 atgttcaaacaaagtattagtatttctcattacatacaggacaatcttcgtatagagaatctgatactagatgggtgtga catcggagaccagggtgtggtctacgtggctcaactactcctggacaacttggttatatcaagactgaatctgtcaaaca attcaatgggagaatcttgttcaaaagcattatcgatagctttaaccagtaacaacacgctccttcatctcaatctatcg gacaataagcttgatgataatgcagcttttggcttagcaccaggattagcaaaaaactcagttcttgtgaagataaacct atcctggaatggtctgggctatgaaggagcggtgggtgtgtccaaagccttgaagcagtgccacaccctaaaatacttgg acatctcccataacaggatcaactgggacgcagcactcgtcatttccaaaagtcttgcagtcaactgttctctggaaacg ctcaaggttggtgataatccactgaccaccacgggagccaatgatatcgtccaggctgcatcatctgataagtgccaact tagactccttgatctcatgaatgtagcagtacttgctgataccgaatttctggctatcatcatacagcggaaacgaaagt tcaaatttattcatggcggaatcgtccatactcccgatgttctaggtcaaaggaaggaaagggagataactgcgatggag cgagttattgagtatatgaggagactcggcattcgtcctgtggaactccttagggcgttcgacaaatctgtctctttcaa tgttacaaagaaagagtttattggtagattgaaggtactatttaagacaaatgtgggtctacatcagtatgaaatggaag ctctagcaaacgcagtggcatcaaaaggcatggacggaggtggaattagctataggaaacttgtagatgcggttcaagat gaagttctactagaaagaaacagaaaaatagcagaacggaagcggaaggagaaacgtattgcttttcacaagaggatcct ggacataaaacttccagtagaagctgtctccgaagttgaggaagaaattgccctgaagaaggcgattctagagggtcaaa ctggaagttttactcgaccaggaactggaatgagttctctctcatcttcctcattcacaacgttatctctgcttaaggac aaaccttttctggcatcgcaatcatcgtcaagtctgttaggaggaagtcgttcatatgcgaaactaccgattatagaact ggatacggtcagagaaaaacaagttccggtcatcaaatctaaatcaaaaacttcactttcaatgtgtgcccctctagaaa aatcaacgaaagagaagaagaaaaagaagaagaaacgaataaagaaaagttcatatgatcgtcaagtgccctcgtggatg tcgagctaccaagtctga |
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Protein
| Protein ID | pfu_aug2.0_1752.1_08559.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1752.1_08559.t1 MFKQSISISHYIQDNLRIENLILDGCDIGDQGVVYVAQLLLDNLVISRLNLSNNSMGESCSKALSIALTSNNTLLHLNLS DNKLDDNAAFGLAPGLAKNSVLVKINLSWNGLGYEGAVGVSKALKQCHTLKYLDISHNRINWDAALVISKSLAVNCSLET LKVGDNPLTTTGANDIVQAASSDKCQLRLLDLMNVAVLADTEFLAIIIQRKRKFKFIHGGIVHTPDVLGQRKEREITAME RVIEYMRRLGIRPVELLRAFDKSVSFNVTKKEFIGRLKVLFKTNVGLHQYEMEALANAVASKGMDGGGISYRKLVDAVQD EVLLERNRKIAERKRKEKRIAFHKRILDIKLPVEAVSEVEEEIALKKAILEGQTGSFTRPGTGMSSLSSSSFTTLSLLKD KPFLASQSSSSLLGGSRSYAKLPIIELDTVREKQVPVIKSKSKTSLSMCAPLEKSTKEKKKKKKKRIKKSSYDRQVPSWM SSYQV |
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