Gene
| Gene Model ID | pfu_aug2.0_1755.1_18510 |
|---|---|
| Locus | scaffold1755.1 : 12856 ... 16837 : + |
| To GenomeBrowser | scaffold1755.1:12856..16837 |
| Genes list of scaffold | scaffold1755.1 |
| Synonym | pfu_aug1.0_15168.1_61462 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1755.1_18510.t1 | 1 | 1 | TatD_DNase | 1063 | 1265 | 4.1e-25 | 88.4 | 5.2e-29 | 7.7e-25 | 87.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1755.1_18510.t1 | gi|16077107|ref|NP_387920.1| | 5.0e-14 | |
| pfu_aug2.0_1755.1_18510.t1 | gi|504282496|ref|WP_014469598.1| | MULTISPECIES: hydrolase TatD [Bacillus subtilis group] | 1.0e-13 |
| pfu_aug2.0_1755.1_18510.t1 | gi|503878301|ref|WP_014112295.1| | hydrolase TatD [Bacillus subtilis] | 3.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_1755.1_18510.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1755.1_18510.t1 atgccatcttcacatttacactttgatgcttcaagtcatccttctgttgcccatcaccaaaatgtgaaaatacccgattt tatacaagatgaccacgtgatgcagacaagtacatacgctattggcaatcaaatagggagaagaccagcattgttaccta caccagatatgactgttgccagtggtaccaatgataccaagagccaaaatcctagtcctcaatcagctagagctgcatct caattagggagaattgcatctcatacttctaatgatggaaacagtgccacttattcgaaagatcagtatggctatggagc acctactgtgttacctactccaaaattgaatgttaccgatggattcagtaatcctaagagtcaaaattctagtcctcact tagctagaactacatctcatacttctaataacattgccaataattcaaaagatcaatatcgctatggtcaacccactgtg ttacctactccaaaaatgaatgttactgatgtcagcagtaatactaagagtcaaaatccaagtcctcaaacagctagagc tacatctcatgcttctaataatgggaaaaatgccactaattcaaaggatcagtatcgctattctgcacctactgcacttc cagagtcagctagagtatggataaatcctaatttacagaagcaggcaccaaaacctgcatcaatacatgaaagcatttgg aaaaaatacagcagaaagaggaaatctggaccttttgatgtgactaaccctttgaaaagaaaaattcctgaatcaggcca aggtaatgatacatcagatactcagaactctgataagtcctttgaagaaaatcctgatgcagatgtacaggattcatcag tgccaaagaaaagagacgcagacccaaaaacccatacagccgagagcaggagaatgaaatggcatgttggaattgaacac ttgaatccagcctttgacaggattgatgcgtatcaaaatccacgccatcatattgctcgcagagatgggttggagtggct tgctaagaaaattttaggtcccaaagctagcattaacgatcttgttcctctgctgaatcggtctaacatcatacataaca atagtgtgctgtctgataaggatatcgcaaacatggagtccatgtgcagggcaatgaattgggagaggccacctgcattt acactacatcctatcaactctcccagtgtactcttgttctggcgatgtctgctcaatctggccatgatgttaaaaccaga ggatcatcagcgcttcatgaaagaaactacgacaaacctgcttaaacagtactattcagaaaattcaactgcagaagcaa aagatgtggttaacagaccagtatctgtagagcagaaagcaaacacaacatcgtcacaaccaaacgttgctttattagga agaaatgatataaactcaagactggaaaatataaggaagctaattgctcagcatgctgatgttgataaggtgcagatacc taactttaaaagtattggagccgtaggtcagcagaaatcacctgacattaagagcagtactacattaggacccaggaagg catccgactttcatagtccagcaaatttaggtaaccagacattgcctgatgttaagagaagtgtacctgtaggttaccaa aggacacccaattttcagagtgttgcaagttcaggtaaccatacgatgcatggtaataagagtaatttagcatcagatag cccaaagacacccagtattcaaagtattacaacctcgggtaaacatacattgccggacattcagagaagtgaagctgtag gtagacaaagggcacccaactttcagagtgttgaaagtcaaggtaacaaaaggatgacagacgttagaaggaatgttgct gtaagtaaccagatgacaactgattttcagagggttcccagcttagataaacagagagcatcagactttcagagtattgc agcattcgagaaccggaaggcaactgattctaacactatttcaacctttggtaataaccaggggacacctgactttcaga gtatttcagcttcaggtatcaaaaagacaccagactctacaagttcagatatatttaggagcaaccagcagacacatgac tccatgcattttgcagccttcagtagcaaccagcagagtcctgataccagaagttttgcagcctttggtagcaaccagaa ggcacctgactttcagagtattgcagcattaagtagcaaaatgtcaccaagctccacgagttctgcagccttcagtagca accaagagagtcctgattccatgagttttaccacctttggtagcaaccaacagagtcctgactctcagaatattcagctt ttcagcaaccagccgacaactgatgctaagaatattcaacagttcagtaggcacgagcaggcatatgcctttatgagaag agttcaagcccttaacagaaaccagagggcgccaggtcctaagaagaatgccgctgtaaatagaaaccagcagatgtcaa actttaataaaggtgtagccttgaatagcatccagccgccaccagaatttaagagggtagaacctttaataagtctgcaa caatcaccagacttgatgaggagttcagccttgagaggaaatcaagagatccctacatttgagaggattgcagcatcaaa cagtacccaacagtcacctgattttaaaagtattgcagtctcaagtaaccaacagacatctgactttaaaagtgcggccg cccaaagtaaccaaaacagtgaagtgtccagtactcaagggcctccagaagagatgatgtcatctttgggtggatggaga gatggtagtgacagtaagaaaacagcgagtggacaccagaaagcagccgctgcatctatgtcaagtattcttctagaaaa tgtggactgtgtgttcgactcatatttaaatgttgaggaaatgtgtcagatattgtataagaggaaaagttggtcatttg ggagacagcctttgaagacgatttttaaaactaggataatgagagaggttgaaccaaaacatgcagtgacggtagtaggg ggagtaatgatattcgatgatccaagttgctatccgaaaaagtctcacgttgaccctacgtggaatgtggcgtttggcgt acatccaaaacatgctccatttcttacggaggagcaattaagtagacttgccaaaattttgcaaggaagagagattcggg cattgggaacgataggattcgactatacagaacagaagacgtactgggattttcaagaggaggttttcgttaatcttcta ggactgagtgaacctgacagacctataataattcatgtaaaaggcgtggagggagatgtgcttggatccagtgttcataa gaaatgctttactaaagtgaaagaaaaatgtccaaagcaacagaaaattcaattgcattcattttctggtactcccgaag atgtcggaatgtggacgacagaattttctaattgctacttcagcttcacgtggaatgtagagttctttaacgagattcag aagagtgctatcaggagtgtaccacatgacaaaatcttgatcgagactggaattttggaccagtctgtctcattaccgag gactgcgatcaagagacccactcaactgggtgatctcgcttctttgattgctgagataaggggagaaaagttcgatgaat tcttgaagcaaaccgtagaaaatggacaacgcctacatgggacgagaatagtcaagaaaaaatcacgatga |
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Protein
| Protein ID | pfu_aug2.0_1755.1_18510.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1755.1_18510.t1 MPSSHLHFDASSHPSVAHHQNVKIPDFIQDDHVMQTSTYAIGNQIGRRPALLPTPDMTVASGTNDTKSQNPSPQSARAAS QLGRIASHTSNDGNSATYSKDQYGYGAPTVLPTPKLNVTDGFSNPKSQNSSPHLARTTSHTSNNIANNSKDQYRYGQPTV LPTPKMNVTDVSSNTKSQNPSPQTARATSHASNNGKNATNSKDQYRYSAPTALPESARVWINPNLQKQAPKPASIHESIW KKYSRKRKSGPFDVTNPLKRKIPESGQGNDTSDTQNSDKSFEENPDADVQDSSVPKKRDADPKTHTAESRRMKWHVGIEH LNPAFDRIDAYQNPRHHIARRDGLEWLAKKILGPKASINDLVPLLNRSNIIHNNSVLSDKDIANMESMCRAMNWERPPAF TLHPINSPSVLLFWRCLLNLAMMLKPEDHQRFMKETTTNLLKQYYSENSTAEAKDVVNRPVSVEQKANTTSSQPNVALLG RNDINSRLENIRKLIAQHADVDKVQIPNFKSIGAVGQQKSPDIKSSTTLGPRKASDFHSPANLGNQTLPDVKRSVPVGYQ RTPNFQSVASSGNHTMHGNKSNLASDSPKTPSIQSITTSGKHTLPDIQRSEAVGRQRAPNFQSVESQGNKRMTDVRRNVA VSNQMTTDFQRVPSLDKQRASDFQSIAAFENRKATDSNTISTFGNNQGTPDFQSISASGIKKTPDSTSSDIFRSNQQTHD SMHFAAFSSNQQSPDTRSFAAFGSNQKAPDFQSIAALSSKMSPSSTSSAAFSSNQESPDSMSFTTFGSNQQSPDSQNIQL FSNQPTTDAKNIQQFSRHEQAYAFMRRVQALNRNQRAPGPKKNAAVNRNQQMSNFNKGVALNSIQPPPEFKRVEPLISLQ QSPDLMRSSALRGNQEIPTFERIAASNSTQQSPDFKSIAVSSNQQTSDFKSAAAQSNQNSEVSSTQGPPEEMMSSLGGWR DGSDSKKTASGHQKAAAASMSSILLENVDCVFDSYLNVEEMCQILYKRKSWSFGRQPLKTIFKTRIMREVEPKHAVTVVG GVMIFDDPSCYPKKSHVDPTWNVAFGVHPKHAPFLTEEQLSRLAKILQGREIRALGTIGFDYTEQKTYWDFQEEVFVNLL GLSEPDRPIIIHVKGVEGDVLGSSVHKKCFTKVKEKCPKQQKIQLHSFSGTPEDVGMWTTEFSNCYFSFTWNVEFFNEIQ KSAIRSVPHDKILIETGILDQSVSLPRTAIKRPTQLGDLASLIAEIRGEKFDEFLKQTVENGQRLHGTRIVKKKSR |
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