Gene
| Gene Model ID | pfu_aug2.0_1755.1_18511 |
|---|---|
| Locus | scaffold1755.1 : 22507 ... 33825 : - |
| To GenomeBrowser | scaffold1755.1:22507..33825 |
| Genes list of scaffold | scaffold1755.1 |
| Synonym | pfu_aug1.0_1004.1_15306 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1755.1_18511.t1 | 1 | 1 | zf-RING_5 | 23 | 67 | 8.6e-06 | 25.3 | 1.1e-08 | 2.2e-05 | 24.0 |
| pfu_aug2.0_1755.1_18511.t1 | 1 | 1 | zf-C3HC4 | 24 | 66 | 7.7e-08 | 31.8 | 1.0e-10 | 2.2e-07 | 30.4 |
| pfu_aug2.0_1755.1_18511.t1 | 1 | 1 | zf-C3HC4_2 | 24 | 66 | 6.0e-06 | 26.1 | 6.8e-09 | 1.4e-05 | 24.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1755.1_18511.t1 | gi|260817090|ref|XP_002603420.1| | hypothetical protein BRAFLDRAFT_222555 [Branchiostoma floridae] | 3.0e-12 |
| pfu_aug2.0_1755.1_18511.t1 | gi|390359851|ref|XP_003729576.1| | PREDICTED: tripartite motif-containing protein 59-like [Strongylocentrotus purpuratus] | 1.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_1755.1_18511.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1755.1_18511.t1 atgttggaacacgaggaatctgaccggaatcttgaaaagataccacttccgctctcgcagaatctgagttgcaaactttg cctgggactgtaccgtgagcccaaactgttgacgtgtttacacagcttctgtagagcatgtttacagacttattgcgaag acagggggatagaggatgaattagagtgtcctacatgtaatgaagtgacaattctacctaaggacggattagacgggctg gttgacaatgatatagtcgtgcagcggatacagagaaatatcgacctgttcaatatctgtattaatctaggtgaagaata tgacggaccccctgatgcaaacgatgaaggggatatgtcaagagacgaaagtggagaggaccctaaaacgtcgaatcgtc tgcagtccataggtgccacaacggtaccgaagtcatatgcatttcaccaacaacaagttctatccaggaggcgcttgcag aaaatgttatctagccttcaaaatgaggccatcaatattgtttatgcgatagatgtcttgaacgatgaaaaacagaacac tgcaaaaatgaaggccaaaaagaaagagatgattcaaattaggtccaggaatatcatagactctgttcgtaggcgtgaaa gaaaattgcttagcgaacttgagaagtcggactgcgataaaatctttttggacgaaattgcttctgcaaaaacttgctta caaggtaatatgagaaagttgctgtccgttgtcgattttgtccgacttctaatagactctggcaacgatattgaggtcgg aaactactttggcctcatttcaaatagagtagattctttggcaaaagcgaaaatgacgctgagcaaaagttctatggact tcaacactcctaccgggaatttggatgacagcattgcagatttattcggaagcttttcattcaagaatgaagaaatccaa atctgggaaatgccgtccgaaattacacacaatgccttagaagagaaaatagacgaagaaaacgactccggacaaccaat caacggtgacgaaaatggtgacgtcacgaggagatacagtatgacagataatgtacccgaactgcccaaaagtacaatta taaaagtcccgagaagggtaagcatcgcagagtgcagtcctctgaccttgaagaagagacccatcagggtcagtcattcc tttgatatcaattttcgagcaggggagggagaaatgatgtcgaccacgcccattgaaactgacatctccacgaatcagtt acagatcgatagtgatgaaactcatatgtcacctgatgaatctaatccaatcaagtatcgatggcgcaagatgaaccggc gccacaccgtggacgatatacaaaaagaaatacaaatcaatgacgaaaaatgggacacgttgttcccagccacgccgacc gatagatccagaacgagggtgcgtcacatgagtgaagatttgcatagaacgcgccaaatgatcaacatttgtaaacggca aatcgcagagtcgaagactcgtgtgataccggaagtcagtaattacggaagcggaattgttaaacgtctcaagaagaagg gagaggatctccaacaagaccctgttgcagcaccaacagcaaaacacccgatgtatcgaagaacgtacaattgtggtgta aaacaacctcctcactgtaagatgacatcacacaaacaagactgcaacacagatgaaaatggatatagaaagagggcgtg tgtaatacagtccgtgctctgccggctgcagcaagctcatgtatgtaatcatccgaggagtccgactgacattcagagag gacaggcggtcggggtcctgtcttctctaaagaggtttggacacggcccgtcatggagtcccgtcgtcagacagtcagag tgcaagtctcaaggatgcgctggtataagactgtag |
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Protein
| Protein ID | pfu_aug2.0_1755.1_18511.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1755.1_18511.t1 MLEHEESDRNLEKIPLPLSQNLSCKLCLGLYREPKLLTCLHSFCRACLQTYCEDRGIEDELECPTCNEVTILPKDGLDGL VDNDIVVQRIQRNIDLFNICINLGEEYDGPPDANDEGDMSRDESGEDPKTSNRLQSIGATTVPKSYAFHQQQVLSRRRLQ KMLSSLQNEAINIVYAIDVLNDEKQNTAKMKAKKKEMIQIRSRNIIDSVRRRERKLLSELEKSDCDKIFLDEIASAKTCL QGNMRKLLSVVDFVRLLIDSGNDIEVGNYFGLISNRVDSLAKAKMTLSKSSMDFNTPTGNLDDSIADLFGSFSFKNEEIQ IWEMPSEITHNALEEKIDEENDSGQPINGDENGDVTRRYSMTDNVPELPKSTIIKVPRRVSIAECSPLTLKKRPIRVSHS FDINFRAGEGEMMSTTPIETDISTNQLQIDSDETHMSPDESNPIKYRWRKMNRRHTVDDIQKEIQINDEKWDTLFPATPT DRSRTRVRHMSEDLHRTRQMINICKRQIAESKTRVIPEVSNYGSGIVKRLKKKGEDLQQDPVAAPTAKHPMYRRTYNCGV KQPPHCKMTSHKQDCNTDENGYRKRACVIQSVLCRLQQAHVCNHPRSPTDIQRGQAVGVLSSLKRFGHGPSWSPVVRQSE CKSQGCAGIRL |
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