Gene
Gene Model ID | pfu_aug2.0_1755.1_18513 |
---|---|
Locus | scaffold1755.1 : 41576 ... 128975 : + |
To GenomeBrowser | scaffold1755.1:41576..128975 |
Genes list of scaffold | scaffold1755.1 |
Synonym | pfu_aug1.0_66349.1_34753 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
calmodulin-like protein 12-like | GO:0000922 GO:0002027 GO:0002576 GO:0005509 GO:0005513 GO:0005654 GO:0005813 GO:0005829 GO:0005876 GO:0005886 GO:0005980 GO:0006006 GO:0007005 GO:0007173 GO:0007202 GO:0007268 GO:0008543 GO:0009405 GO:0010800 GO:0010801 GO:0010881 GO:0019901 GO:0019904 GO:0021762 GO:0022400 GO:0030017 GO:0030168 GO:0030801 GO:0031432 GO:0031954 GO:0031996 GO:0031997 GO:0032465 GO:0032516 GO:0034704 GO:0035307 GO:0038095 GO:0043274 GO:0043539 GO:0043647 GO:0044325 GO:0045087 GO:0046209 GO:0048010 GO:0048011 GO:0050999 GO:0051343 GO:0060316 GO:0061024 GO:0070062 GO:0071902 GO:0072542 GO:1901844 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1755.1_18513.t2 | 2 | 1 | EF-hand_7 | 33 | 38 | 2.7e-09 | 37.0 | 2.9 | 6100.0 | -2.6 |
pfu_aug2.0_1755.1_18513.t2 | 3 | 1 | EF-hand_1 | 33 | 37 | 9.2e-09 | 33.9 | 2.5 | 5200.0 | -2.8 |
pfu_aug2.0_1755.1_18513.t2 | 2 | 1 | EF-hand_6 | 33 | 38 | 2.9e-08 | 32.8 | 7.0 | 15000.0 | -3.7 |
pfu_aug2.0_1755.1_18513.t2 | 2 | 2 | EF-hand_7 | 54 | 100 | 2.7e-09 | 37.0 | 1.3e-12 | 2.7e-09 | 37.0 |
pfu_aug2.0_1755.1_18513.t2 | 3 | 2 | EF-hand_1 | 54 | 81 | 9.2e-09 | 33.9 | 2.4e-11 | 5.1e-08 | 31.6 |
pfu_aug2.0_1755.1_18513.t2 | 2 | 2 | EF-hand_6 | 54 | 82 | 2.9e-08 | 32.8 | 1.4e-11 | 2.9e-08 | 32.8 |
pfu_aug2.0_1755.1_18513.t2 | 1 | 1 | EF-hand_5 | 55 | 75 | 2.1e-07 | 29.9 | 2.4e-10 | 5.0e-07 | 28.7 |
pfu_aug2.0_1755.1_18513.t2 | 3 | 3 | EF-hand_1 | 89 | 100 | 9.2e-09 | 33.9 | 0.02 | 43.0 | 3.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1755.1_18513.t2 | gi|544210304|ref|XP_005535553.1| | similar to calmodulin [Cyanidioschyzon merolae strain 10D] | 2.0e-10 |
Transcript
Transcript ID | pfu_aug2.0_1755.1_18513.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1755.1_18513.t1 atgccgttttttacgcagtcaagtaaatgtaagaagctgatccggctcagtccgaaaagcaagaagaagcactctggctg caagtccaaggaacacaacggtatggataaagatcacaaaaattcacgcatgcccaatggctttacagacagagaaaacc aagacatgaaacaagcatttgatctctttgacaagaaccatgacggtaggatctctagtgatgagctgggtatggttctc aggacgttagggcataactacactcaggcagaagtagaggaaatgattaaaacggcagacacaaatgtacgttataggag ttgttactgcaattctacgcaaatcggtgtttaa |
|
Transcript ID | pfu_aug2.0_1755.1_18513.t2 |
Definition | - |
>pfu_aug2.0_1755.1_18513.t2 atggcaaccgtgtcaagtaaatgtaagaagctgatccggctcagtccgaaaagcaagaagaagcactctggctgcaagtc caaggaacacaacggtatggataaagatcacaaaaattcacgcatgcccaatggctttacagacagagaaaaccaagaca tgaaacaagcatttgatctctttgacaagaaccatgacggtaggatctctagtgatgagctgggtatggttctcaggacg ttagggcataactacactcaggcagaagtagaggaaatgattaaaacggcagacacaaatgtacgttataggagttgtta ctgcaattctacgcaaatcggtgtttaa |
Protein
Protein ID | pfu_aug2.0_1755.1_18513.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1755.1_18513.t1 MPFFTQSSKCKKLIRLSPKSKKKHSGCKSKEHNGMDKDHKNSRMPNGFTDRENQDMKQAFDLFDKNHDGRISSDELGMVL RTLGHNYTQAEVEEMIKTADTNVRYRSCYCNSTQIGV |
|
Protein ID | pfu_aug2.0_1755.1_18513.t2 |
Definition | - |
>pfu_aug2.0_1755.1_18513.t2 MATVSSKCKKLIRLSPKSKKKHSGCKSKEHNGMDKDHKNSRMPNGFTDRENQDMKQAFDLFDKNHDGRISSDELGMVLRT LGHNYTQAEVEEMIKTADTNVRYRSCYCNSTQIGV |