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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1755.1_18513
Locus scaffold1755.1 : 41576 ... 128975 : +
To GenomeBrowser scaffold1755.1:41576..128975
Genes list of scaffold scaffold1755.1
Synonym pfu_aug1.0_66349.1_34753

Manual annotation
Annotation by Blast2GO
Annotation GO
calmodulin-like protein 12-like GO:0000922 GO:0002027 GO:0002576 GO:0005509 GO:0005513 GO:0005654 GO:0005813 GO:0005829 GO:0005876 GO:0005886 GO:0005980 GO:0006006 GO:0007005 GO:0007173 GO:0007202 GO:0007268 GO:0008543 GO:0009405 GO:0010800 GO:0010801 GO:0010881 GO:0019901 GO:0019904 GO:0021762 GO:0022400 GO:0030017 GO:0030168 GO:0030801 GO:0031432 GO:0031954 GO:0031996 GO:0031997 GO:0032465 GO:0032516 GO:0034704 GO:0035307 GO:0038095 GO:0043274 GO:0043539 GO:0043647 GO:0044325 GO:0045087 GO:0046209 GO:0048010 GO:0048011 GO:0050999 GO:0051343 GO:0060316 GO:0061024 GO:0070062 GO:0071902 GO:0072542 GO:1901844

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1755.1_18513.t2 2 1 EF-hand_7 33 38 2.7e-09 37.0 2.9 6100.0 -2.6
pfu_aug2.0_1755.1_18513.t2 3 1 EF-hand_1 33 37 9.2e-09 33.9 2.5 5200.0 -2.8
pfu_aug2.0_1755.1_18513.t2 2 1 EF-hand_6 33 38 2.9e-08 32.8 7.0 15000.0 -3.7
pfu_aug2.0_1755.1_18513.t2 2 2 EF-hand_7 54 100 2.7e-09 37.0 1.3e-12 2.7e-09 37.0
pfu_aug2.0_1755.1_18513.t2 3 2 EF-hand_1 54 81 9.2e-09 33.9 2.4e-11 5.1e-08 31.6
pfu_aug2.0_1755.1_18513.t2 2 2 EF-hand_6 54 82 2.9e-08 32.8 1.4e-11 2.9e-08 32.8
pfu_aug2.0_1755.1_18513.t2 1 1 EF-hand_5 55 75 2.1e-07 29.9 2.4e-10 5.0e-07 28.7
pfu_aug2.0_1755.1_18513.t2 3 3 EF-hand_1 89 100 9.2e-09 33.9 0.02 43.0 3.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1755.1_18513.t2 gi|544210304|ref|XP_005535553.1| similar to calmodulin [Cyanidioschyzon merolae strain 10D] 2.0e-10

Transcript
Transcript IDpfu_aug2.0_1755.1_18513.t1
Definition-
>pfu_aug2.0_1755.1_18513.t1
atgccgttttttacgcagtcaagtaaatgtaagaagctgatccggctcagtccgaaaagcaagaagaagcactctggctg
caagtccaaggaacacaacggtatggataaagatcacaaaaattcacgcatgcccaatggctttacagacagagaaaacc
aagacatgaaacaagcatttgatctctttgacaagaaccatgacggtaggatctctagtgatgagctgggtatggttctc
aggacgttagggcataactacactcaggcagaagtagaggaaatgattaaaacggcagacacaaatgtacgttataggag
ttgttactgcaattctacgcaaatcggtgtttaa
Transcript IDpfu_aug2.0_1755.1_18513.t2
Definition-
>pfu_aug2.0_1755.1_18513.t2
atggcaaccgtgtcaagtaaatgtaagaagctgatccggctcagtccgaaaagcaagaagaagcactctggctgcaagtc
caaggaacacaacggtatggataaagatcacaaaaattcacgcatgcccaatggctttacagacagagaaaaccaagaca
tgaaacaagcatttgatctctttgacaagaaccatgacggtaggatctctagtgatgagctgggtatggttctcaggacg
ttagggcataactacactcaggcagaagtagaggaaatgattaaaacggcagacacaaatgtacgttataggagttgtta
ctgcaattctacgcaaatcggtgtttaa

Protein
Protein IDpfu_aug2.0_1755.1_18513.t1
Definition-
>pfu_aug2.0_1755.1_18513.t1
MPFFTQSSKCKKLIRLSPKSKKKHSGCKSKEHNGMDKDHKNSRMPNGFTDRENQDMKQAFDLFDKNHDGRISSDELGMVL
RTLGHNYTQAEVEEMIKTADTNVRYRSCYCNSTQIGV
Protein IDpfu_aug2.0_1755.1_18513.t2
Definition-
>pfu_aug2.0_1755.1_18513.t2
MATVSSKCKKLIRLSPKSKKKHSGCKSKEHNGMDKDHKNSRMPNGFTDRENQDMKQAFDLFDKNHDGRISSDELGMVLRT
LGHNYTQAEVEEMIKTADTNVRYRSCYCNSTQIGV

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