Gene
| Gene Model ID | pfu_aug2.0_1770.1_01821 |
|---|---|
| Locus | scaffold1770.1 : 34396 ... 37804 : + |
| To GenomeBrowser | scaffold1770.1:34396..37804 |
| Genes list of scaffold | scaffold1770.1 |
| Synonym | pfu_aug1.0_16816.1_54344 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| paired box protein pax-8 isoform 5 | GO:0003700 GO:0005515 GO:0005634 GO:0030878 GO:0042472 GO:0043565 GO:0044212 GO:0045893 GO:0048793 GO:0072108 GO:0072289 GO:0072305 GO:0072307 GO:0090190 GO:1900215 GO:1900218 GO:2000594 GO:2000611 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1770.1_01821.t1 | 1 | 1 | PAX | 3 | 56 | 1.7e-18 | 66.5 | 2.0e-22 | 2.9e-18 | 65.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1770.1_01821.t1 | gi|524871011|ref|XP_005092282.1| | PREDICTED: uncharacterized protein LOC101859841 [Aplysia californica] | 6.0e-23 |
| pfu_aug2.0_1770.1_01821.t1 | gi|676486976|ref|XP_009064149.1| | hypothetical protein LOTGIDRAFT_99097, partial [Lottia gigantea] | 1.0e-19 |
| pfu_aug2.0_1770.1_01821.t1 | gi|170046561|ref|XP_001850829.1| | conserved hypothetical protein [Culex quinquefasciatus] | 1.0e-19 |
| pfu_aug2.0_1770.1_01821.t1 | gi|470603507|ref|XP_004313076.1| | PREDICTED: paired box protein Pax-8 isoform 5 [Tursiops truncatus] | 8.0e-18 |
| pfu_aug2.0_1770.1_01821.t1 | gi|466085972|ref|XP_004285685.1| | PREDICTED: paired box protein Pax-8 isoform X5 [Orcinus orca] | 1.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_1770.1_01821.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1770.1_01821.t1 atgtcaaccgagcaagttgctaccccttatgtcatcaagaggattatcgacataaagcgtcaaaatccagccagcttcgc ctgggaaatccgagaccaattgattgccacaggaatttgcgatgaacacactattccatctgtaagctcgatcaatagaa ttctgagaaatgccgcctctttttctgaaacatacgacttgcccactgatccagtacctttgagtcacgtgacacaagtg cactctacttttccaagacttccggtgatgatgacgtcacttcctcattcttcgccaatgactgatcgttttccatcgtc tatccccgggttatcctatcccaaaatggttgaacagatcgaacctgaagatgaaataaaaacatcgttggaaaattcgg gcgaaaagaaagatcaaagcagagctgaccaaaaacgaacagaggaaaaatcagagaaagaagataatttcaaattggaa gagcgtttcccaagtatgtcaaacaaagtgagaacatcaactgaaaatcccctgtataagccattgtgtttccctgacta tacatcaaacaaataccatccatatctaccacgtgancaaagtaacggggatgctatatttctctcatgttga |
|
Protein
| Protein ID | pfu_aug2.0_1770.1_01821.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1770.1_01821.t1 MSTEQVATPYVIKRIIDIKRQNPASFAWEIRDQLIATGICDEHTIPSVSSINRILRNAASFSETYDLPTDPVPLSHVTQV HSTFPRLPVMMTSLPHSSPMTDRFPSSIPGLSYPKMVEQIEPEDEIKTSLENSGEKKDQSRADQKRTEEKSEKEDNFKLE ERFPSMSNKVRTSTENPLYKPLCFPDYTSNKYHPYLPRXQSNGDAIFLSC |
|