Gene
| Gene Model ID | pfu_aug2.0_1770.1_01827 |
|---|---|
| Locus | scaffold1770.1 : 96720 ... 115635 : - |
| To GenomeBrowser | scaffold1770.1:96720..115635 |
| Genes list of scaffold | scaffold1770.1 |
| Synonym | pfu_aug1.0_9525.1_46050 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| poly | GO:0044699 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1770.1_01827.t1 | 1 | 1 | WGR | 14 | 52 | 8.6e-07 | 28.8 | 4.6e-10 | 2.3e-06 | 27.4 |
| pfu_aug2.0_1770.1_01827.t1 | 1 | 1 | PARP_reg | 83 | 191 | 2.6e-31 | 108.0 | 8.5e-35 | 4.2e-31 | 107.3 |
| pfu_aug2.0_1770.1_01827.t1 | 2 | 1 | PARP | 157 | 184 | 0.0 | 165.4 | 0.41 | 2000.0 | -2.1 |
| pfu_aug2.0_1770.1_01827.t1 | 2 | 2 | PARP | 194 | 433 | 0.0 | 165.4 | 0.0 | 0.0 | 159.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1770.1_01827.t1 | gi|260804813|ref|XP_002597282.1| | hypothetical protein BRAFLDRAFT_203655 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1770.1_01827.t1 | gi|390355330|ref|XP_785135.3| | PREDICTED: poly [ADP-ribose] polymerase 3 isoform X2 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_1770.1_01827.t1 | gi|676454313|ref|XP_009053640.1| | hypothetical protein LOTGIDRAFT_214893 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1770.1_01827.t1 | gi|585704687|ref|XP_006823496.1| | PREDICTED: poly [ADP-ribose] polymerase 3-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1770.1_01827.t1 | gi|632946735|ref|XP_007888705.1| | PREDICTED: poly [ADP-ribose] polymerase 3 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1770.1_01827.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1770.1_01827.t1 atgtttatagaagtagagtccaaatacaaaacgtataagggtgaacctggagcaaatgccaacaaaggtttctcttcagc agatgatgccattaaggacttcaagaaaaagttttccgacaaaaccaaaaacaaatgggagaaccgaggatcgtttaagc ctgtacccggaaaatatacaatgatagatatggctgcagatgatgaggaggatgaaactgacgctcctagagggtatgaa ttctttccagatgttaagaaaatgccactaggaaaattaagtaagacgcagattgccaaaggatttgaatgtctggaaga aatagaagaggccgttaaagcaaagaagccaaagaatacactagcggctctgtcgtctaaattctacacgttgattccac atgattttggtagaaaaatccctccagtgatgaatgatttagaaacagtgcgacagaaatatgacatgttattggttttg ggagatattgagttggcacagtccatgcaaaaagacaaagacaaagtggccactaaaggtgacaagccacctcatccatt ggatgtcaactatggtctactcaagtgtaagctagacttactggatggtaaatcaaaggaatttaaggtcctggagacat acacaaaagaaacaggaaacaaaggtggatggagagtacctaaaatcaaacatatctggaagatggagagagatggggag aaatccagattttctgcacacgatggtctaggaaataggaaattgttatggcatggcaccaacgtggctgtagtggcagc cattttgaaaagcggattgcgaattatgccacacagtggtggaagagtaggaaaaggaatctactttgcctcggaaaaca gcaaatcagcaggctatgtgcgttgcgctggtaatacaggaataatgtttctgaatgaggtagcattggggaaagaacac cacataacaaacgatgattggagattgacggcaccacccaaaggatttgattgtatcatcgccaagggatggcacgaacc tgggctgtcacgattcaccgcggttctcgattcaccgcggttcttgacgacagttcgatacacgatacgagatgaggccg tatcgttgatttacgaccctaagaaagacaccaaactgaagttggacggcaaagatgttgttgttccgcaaggtgcccct gtcgaccagccagcatataaccgtaaaagtagctttgaccagagtgaatatctgatctacaaagaatcacagaacattat gagatatctgttgatgattgacttttaa |
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Protein
| Protein ID | pfu_aug2.0_1770.1_01827.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1770.1_01827.t1 MFIEVESKYKTYKGEPGANANKGFSSADDAIKDFKKKFSDKTKNKWENRGSFKPVPGKYTMIDMAADDEEDETDAPRGYE FFPDVKKMPLGKLSKTQIAKGFECLEEIEEAVKAKKPKNTLAALSSKFYTLIPHDFGRKIPPVMNDLETVRQKYDMLLVL GDIELAQSMQKDKDKVATKGDKPPHPLDVNYGLLKCKLDLLDGKSKEFKVLETYTKETGNKGGWRVPKIKHIWKMERDGE KSRFSAHDGLGNRKLLWHGTNVAVVAAILKSGLRIMPHSGGRVGKGIYFASENSKSAGYVRCAGNTGIMFLNEVALGKEH HITNDDWRLTAPPKGFDCIIAKGWHEPGLSRFTAVLDSPRFLTTVRYTIRDEAVSLIYDPKKDTKLKLDGKDVVVPQGAP VDQPAYNRKSSFDQSEYLIYKESQNIMRYLLMIDF |
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