Gene
| Gene Model ID | pfu_aug2.0_1777.1_25143 |
|---|---|
| Locus | scaffold1777.1 : 76744 ... 111435 : - |
| To GenomeBrowser | scaffold1777.1:76744..111435 |
| Genes list of scaffold | scaffold1777.1 |
| Synonym | pfu_aug1.0_147356.1_13932 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1777.1_25143.t1 | 3 | 1 | Lectin_C | 58 | 145 | 1.3e-07 | 32.1 | 9.3e-05 | 0.17 | 12.5 |
| pfu_aug2.0_1777.1_25143.t1 | 5 | 1 | Gal_Lectin | 66 | 66 | 9.24857e-44 | 147.6 | 3.7 | 6900.0 | -2.6 |
| pfu_aug2.0_1777.1_25143.t1 | 5 | 2 | Gal_Lectin | 118 | 200 | 9.24857e-44 | 147.6 | 1.4e-25 | 2.6e-22 | 78.9 |
| pfu_aug2.0_1777.1_25143.t1 | 5 | 3 | Gal_Lectin | 214 | 295 | 9.24857e-44 | 147.6 | 5.3e-23 | 9.7e-20 | 70.6 |
| pfu_aug2.0_1777.1_25143.t1 | 3 | 2 | Lectin_C | 285 | 366 | 1.3e-07 | 32.1 | 3.1e-05 | 0.058 | 14.0 |
| pfu_aug2.0_1777.1_25143.t1 | 3 | 3 | Lectin_C | 371 | 458 | 1.3e-07 | 32.1 | 0.0032 | 5.9 | 7.5 |
| pfu_aug2.0_1777.1_25143.t1 | 5 | 4 | Gal_Lectin | 404 | 469 | 9.24857e-44 | 147.6 | 1.9e-05 | 0.035 | 14.4 |
| pfu_aug2.0_1777.1_25143.t1 | 1 | 1 | ATG16 | 497 | 600 | 1.4e-06 | 28.2 | 1.4e-09 | 2.5e-06 | 27.4 |
| pfu_aug2.0_1777.1_25143.t1 | 5 | 5 | Gal_Lectin | 527 | 538 | 9.24857e-44 | 147.6 | 8.0 | 15000.0 | -4.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1777.1_25143.t1 | gi|156358465|ref|XP_001624539.1| | predicted protein [Nematostella vectensis] | 8.0e-38 |
| pfu_aug2.0_1777.1_25143.t1 | gi|260807884|ref|XP_002598738.1| | hypothetical protein BRAFLDRAFT_95854 [Branchiostoma floridae] | 2.0e-34 |
| pfu_aug2.0_1777.1_25143.t1 | gi|156367532|ref|XP_001627470.1| | predicted protein [Nematostella vectensis] | 2.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_1777.1_25143.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1777.1_25143.t1 atgttcatgattcgtggtggtaacatcactgacaccaaacttcttcgtatatatgtttagttggatgaattgatagaaga gacggctggccttgtagaacctacccctatatgtagtaacttctacacaagggttggggatacatgctacaaacctgtgt ttacattgtcgactcgggacaacgctcagacggcttgtagcggtgatggtggacatttggctaatccagagacaaccagc gaggcgactttactcgtccagtatgctcaaaactgtcttaatctaccaacagttcagtcacaagaaacacagactcaatc tagtatcggctgtgaaggtacatccttgaccataacgtgtccctctggtagccgagttcacattcaggaagccaactatg gtaggacaggtccgtcaagtgatgatccgtgtggcagacccgaggactctaatcagaattgtcgtgagccagattctctt tccattgtcaggaatgtatgtgaaggtcaacagacatgtacggtagctgtgaactcgggaacttttggtggagacccctg cccaggcacattcaagtacttacaagtggaatatatttgctcgcagcgtacgattatttgtgagactaatactggaacca taacttgtccgtctggagagaagatcactattttgtatgcaaactacggtcgcacagcgccacagagtgttgatctctgt aatgatccaagggacacaaataaggattgcagagcagcgacaagcgaagcgacggtaaaggcagcgtgtgacggtcagag cacgtgtacgctcacacctacaaataccttatttggtgatccttgtggtggcacatacaagtatttggaaattctctacg tttgcagtgggcaggcattttggatttgtccgacggacagaatgacggacggtacattcctgtgtgagtcatcaacagtg cagacgtcagaagttccttttgtgggttctaatcctgacggtggggccacagagaactgcgttgccatggtacaggacga ctcgtttaaccccggagacaaagcctgtgatagaaatttcttctacatgtgtgaaaaagctccacaagtcatggcttgta gcggtgatggtggacatttggctaatccagagacaaccagcgaagcggctttactcgtccagtatgctaaaaaattccat actctacgaaccagaatccatattgagaaagctaactatggtaggacgtgtccgtcaagtgagcatccgtgtggaagacc tgaggacgctaatcagaattgtagatatctaaagacagtgtacatagtcccagagaaggaaaagaaacaagttcgcatgg atgagacatgcacgtttcgggcacgtatagccatcgccagtgatcctcaatctaaacaaggtaatatatggccaaagagt gtgaatattattgtgtctagaaatgtaccgaaagacttagcaggatggtcatcccaacccaaagacaaagaagctcgaga cgaaataaacactctccaatccaagcttaagcttgaaaaaagtaactctatcctgaaaaaatgccagcatgatgagacgg ttcgtcagcttgaagatactagggcacatcttgaatttaaaataagaacagcaaatgaggaatacgacgcgtacacagaa aaactaaaagcgaaagataaggaaatagaaaaccttacagagagaaacaaacagtcgtccaaaaccctagaacaagtaca ggatgaattgataagcatgaagatgcatgtatcgtcgcttggtagcagtccagattttaattttaataccaatgagacaa taccaaaggaacaacatacggaaaggccagtgtgctacttatcggaacatcaaacattaatggaataa |
|
Protein
| Protein ID | pfu_aug2.0_1777.1_25143.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1777.1_25143.t1 MFMIRGGNITDTKLLRIYVXLDELIEETAGLVEPTPICSNFYTRVGDTCYKPVFTLSTRDNAQTACSGDGGHLANPETTS EATLLVQYAQNCLNLPTVQSQETQTQSSIGCEGTSLTITCPSGSRVHIQEANYGRTGPSSDDPCGRPEDSNQNCREPDSL SIVRNVCEGQQTCTVAVNSGTFGGDPCPGTFKYLQVEYICSQRTIICETNTGTITCPSGEKITILYANYGRTAPQSVDLC NDPRDTNKDCRAATSEATVKAACDGQSTCTLTPTNTLFGDPCGGTYKYLEILYVCSGQAFWICPTDRMTDGTFLCESSTV QTSEVPFVGSNPDGGATENCVAMVQDDSFNPGDKACDRNFFYMCEKAPQVMACSGDGGHLANPETTSEAALLVQYAKKFH TLRTRIHIEKANYGRTCPSSEHPCGRPEDANQNCRYLKTVYIVPEKEKKQVRMDETCTFRARIAIASDPQSKQGNIWPKS VNIIVSRNVPKDLAGWSSQPKDKEARDEINTLQSKLKLEKSNSILKKCQHDETVRQLEDTRAHLEFKIRTANEEYDAYTE KLKAKDKEIENLTERNKQSSKTLEQVQDELISMKMHVSSLGSSPDFNFNTNETIPKEQHTERPVCYLSEHQTLME |
|