Gene
| Gene Model ID | pfu_aug2.0_1777.1_25144 |
|---|---|
| Locus | scaffold1777.1 : 112296 ... 133508 : + |
| To GenomeBrowser | scaffold1777.1:112296..133508 |
| Genes list of scaffold | scaffold1777.1 |
| Synonym | pfu_aug1.0_18602.1_18554 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1777.1_25144.t1 | 2 | 1 | Lectin_C | 11 | 34 | 1.6e-07 | 31.9 | 0.22 | 3200.0 | -1.2 |
| pfu_aug2.0_1777.1_25144.t1 | 2 | 2 | Lectin_C | 308 | 405 | 1.6e-07 | 31.9 | 2.6e-11 | 3.9e-07 | 30.6 |
Transcript
| Transcript ID | pfu_aug2.0_1777.1_25144.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1777.1_25144.t1 atggtacagttaaacactgacaacaactcagttgatacagctttgtgtcaggtacatgtcaacactgacaacaactcagt tgatacagctttatgtcaggaacctataaacacctacaacaactcagttggtacagctttatgtcagatacataacaaag gaggggatctccaacaacaccaggttgcagcaccaacagcaaaaccccaaaacacccaatgcaaaaacacaaagcagaca aacacagaaagagacgcagaagggacaaggaacgtcaacgcacaacacagaaacatcaaacacaaaggactacacataaa ccaacgagaccaatgggcaaccggtgccgacttaggacggccatctgccacgcaaatagcagaaggtgnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnncacaaaggactacacataaaccaacgagaccaatgggcaaccggtgccgactta ggacggccatctgccacgcaaatagcagaagattcagaggattcgcgctcacaagaaaagtttaacgggcggacagacag acagacagacggccggacgccggacacagggcgatcgcataagctcgactggtctttgaccagtagagctaaaaacaaag tcttttcagagaaggaagatgagagtggtagtgtgctgtttctttgttatgctcccaaaccccctccgtacgtgggctct gcaaggaagggtaacgcttgcttggagttgatgaggctactacacgtagctataccatcaccggcaacctacaactacct aatgtaccactgtaagatgcaaatgaaattattacaaggtgcatttacttgctctcagtattacactacagtcttattcg gcgactcaggatcgtgttatagacctatgtttttaccagccacacgagcagaggcgcaggcaagttgtttagaacaaggt ggacatctagctaacccggagaccagtgtcgaagcttttgctctaacaagctttgcaatatcctcactcagttttcacga gggtaacgagggaacattcacgtgtgaagcgtcaaccaatccgacgtctgctatgacattttttggagctggtcaagatg gcgatgaagccgagaattgtgtgaccttggctcagactgatgtcttcaatcctgcagatgtgaactgtgcagagaaaaga ttcttcatttgtgaaataccaccatagtga |
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Protein
| Protein ID | pfu_aug2.0_1777.1_25144.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1777.1_25144.t1 MVQLNTDNNSVDTALCQVHVNTDNNSVDTALCQEPINTYNNSVGTALCQIHNKGGDLQQHQVAAPTAKPQNTQCKNTKQT NTERDAEGTRNVNAQHRNIKHKGLHINQRDQWATGADLGRPSATQIAEGXXXXXXXXXXXXXHKGLHINQRDQWATGADL GRPSATQIAEDSEDSRSQEKFNGRTDRQTDGRTPDTGRSHKLDWSLTSRAKNKVFSEKEDESGSVLFLCYAPKPPPYVGS ARKGNACLELMRLLHVAIPSPATYNYLMYHCKMQMKLLQGAFTCSQYYTTVLFGDSGSCYRPMFLPATRAEAQASCLEQG GHLANPETSVEAFALTSFAISSLSFHEGNEGTFTCEASTNPTSAMTFFGAGQDGDEAENCVTLAQTDVFNPADVNCAEKR FFICEIPPX |
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