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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1779.1_31892
Locus scaffold1779.1 : 1 ... 4505 : -
To GenomeBrowser scaffold1779.1:1..4505
Genes list of scaffold scaffold1779.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1779.1_31892.t1 1 1 Sulfotransfer_1 50 168 3.5e-20 72.3 1.7e-23 1.3e-19 70.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1779.1_31892.t1 gi|524874757|ref|XP_005094113.1| PREDICTED: sulfotransferase family cytosolic 1B member 1-like [Aplysia californica] 6.0e-21

Transcript
Transcript IDpfu_aug2.0_1779.1_31892.t1
Definition-
>pfu_aug2.0_1779.1_31892.t1
atggattcgtcttactttgatgtactaaaggaacaaagatcggacctacaagtaccaaggtacaaagggataccattatc
gaatttcccaccgttgaaaaagaatgcagatcttcgtatgagagaaattaaaacatttgaaaccaggaaggatgacgttc
tactcagtggatacgccaaatcgggaacgcattggatgttcgaagtcataaacatgctgttatctggcaagccagatctc
tcggaggagtctagcgagacgagaacgttagagatgatcccagacataggtgctttagatagattgtcctccccaaggct
gatcatgacacacctcaacttcagatttctaccaagaggttacctagaggacaaatcgtctaaaatagtacatatagtca
gaaaccctaaagactgtgccgtttcgtgctatcatcacttctcaaaaagtaaaatgagcagttttctagcaccggattgg
gaaacgttgtatcaaaactttatgtcagaag

Protein
Protein IDpfu_aug2.0_1779.1_31892.t1
Definition-
>pfu_aug2.0_1779.1_31892.t1
MDSSYFDVLKEQRSDLQVPRYKGIPLSNFPPLKKNADLRMREIKTFETRKDDVLLSGYAKSGTHWMFEVINMLLSGKPDL
SEESSETRTLEMIPDIGALDRLSSPRLIMTHLNFRFLPRGYLEDKSSKIVHIVRNPKDCAVSCYHHFSKSKMSSFLAPDW
ETLYQNFMSE

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