Gene
| Gene Model ID | pfu_aug2.0_1779.1_31893 |
|---|---|
| Locus | scaffold1779.1 : 9706 ... 18193 : + |
| To GenomeBrowser | scaffold1779.1:9706..18193 |
| Genes list of scaffold | scaffold1779.1 |
| Synonym | pfu_aug1.0_6278.1_59988 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1779.1_31893.t1 | 4 | 1 | EF-hand_1 | 30 | 58 | 2.9e-26 | 88.7 | 3.1e-10 | 3.6e-07 | 29.0 |
| pfu_aug2.0_1779.1_31893.t1 | 4 | 1 | EF-hand_6 | 30 | 59 | 1.6e-21 | 74.1 | 7.7e-10 | 8.8e-07 | 28.3 |
| pfu_aug2.0_1779.1_31893.t1 | 4 | 1 | EF-hand_8 | 31 | 51 | 5.9e-21 | 73.8 | 4.0e-05 | 0.046 | 13.3 |
| pfu_aug2.0_1779.1_31893.t1 | 2 | 1 | EF-hand_7 | 32 | 91 | 7.1e-25 | 86.9 | 7.3e-11 | 8.3e-08 | 32.2 |
| pfu_aug2.0_1779.1_31893.t1 | 4 | 1 | EF-hand_5 | 33 | 52 | 5.1e-20 | 69.8 | 4.1e-09 | 4.6e-06 | 25.7 |
| pfu_aug2.0_1779.1_31893.t1 | 2 | 1 | EF-hand_9 | 34 | 94 | 6.3e-06 | 26.0 | 7.3e-05 | 0.083 | 12.8 |
| pfu_aug2.0_1779.1_31893.t1 | 4 | 2 | EF-hand_8 | 43 | 93 | 5.9e-21 | 73.8 | 5.1e-07 | 0.00058 | 19.4 |
| pfu_aug2.0_1779.1_31893.t1 | 4 | 2 | EF-hand_1 | 81 | 93 | 2.9e-26 | 88.7 | 0.0046 | 5.3 | 6.5 |
| pfu_aug2.0_1779.1_31893.t1 | 4 | 2 | EF-hand_6 | 81 | 92 | 1.6e-21 | 74.1 | 0.53 | 610.0 | 0.7 |
| pfu_aug2.0_1779.1_31893.t1 | 4 | 2 | EF-hand_5 | 81 | 88 | 5.1e-20 | 69.8 | 0.75 | 850.0 | -0.5 |
| pfu_aug2.0_1779.1_31893.t1 | 4 | 3 | EF-hand_8 | 82 | 123 | 5.9e-21 | 73.8 | 4.4e-08 | 5.0e-05 | 22.8 |
| pfu_aug2.0_1779.1_31893.t1 | 4 | 3 | EF-hand_1 | 103 | 130 | 2.9e-26 | 88.7 | 1.2e-10 | 1.4e-07 | 30.2 |
| pfu_aug2.0_1779.1_31893.t1 | 4 | 3 | EF-hand_6 | 103 | 129 | 1.6e-21 | 74.1 | 1.3e-11 | 1.4e-08 | 33.8 |
| pfu_aug2.0_1779.1_31893.t1 | 2 | 2 | EF-hand_7 | 104 | 163 | 7.1e-25 | 86.9 | 1.3e-18 | 1.4e-15 | 57.1 |
| pfu_aug2.0_1779.1_31893.t1 | 4 | 3 | EF-hand_5 | 104 | 126 | 5.1e-20 | 69.8 | 1.0e-10 | 1.2e-07 | 30.7 |
| pfu_aug2.0_1779.1_31893.t1 | 2 | 2 | EF-hand_9 | 107 | 165 | 6.3e-06 | 26.0 | 0.00025 | 0.29 | 11.0 |
| pfu_aug2.0_1779.1_31893.t1 | 4 | 4 | EF-hand_8 | 116 | 165 | 5.9e-21 | 73.8 | 3.3e-16 | 3.7e-13 | 48.8 |
| pfu_aug2.0_1779.1_31893.t1 | 4 | 4 | EF-hand_1 | 139 | 166 | 2.9e-26 | 88.7 | 1.1e-10 | 1.2e-07 | 30.4 |
| pfu_aug2.0_1779.1_31893.t1 | 4 | 4 | EF-hand_5 | 141 | 164 | 5.1e-20 | 69.8 | 1.8e-06 | 0.002 | 17.3 |
| pfu_aug2.0_1779.1_31893.t1 | 4 | 4 | EF-hand_6 | 145 | 166 | 1.6e-21 | 74.1 | 8.9e-05 | 0.1 | 12.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1779.1_31893.t1 | gi|602652254|ref|XP_007432500.1| | PREDICTED: calmodulin isoform X1 [Python bivittatus] | 0.0 |
| pfu_aug2.0_1779.1_31893.t1 | gi|669293589|ref|XP_008639967.1| | PREDICTED: calmodulin [Corvus brachyrhynchos] | 0.0 |
| pfu_aug2.0_1779.1_31893.t1 | gi|733890401|ref|XP_010710170.1| | PREDICTED: calmodulin [Meleagris gallopavo] | 0.0 |
| pfu_aug2.0_1779.1_31893.t1 | gi|727003939|ref|XP_010392081.1| | PREDICTED: calmodulin [Corvus cornix cornix] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1779.1_31893.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1779.1_31893.t1 atgccagggcatattccaagtatgagaatttcatcgttagagccagacggcttgcaagttgaagaactctcacaagaaca agttcaagatttcaagaatgcgtttgatcgctttgatgagaatggtgacggtaccatcactaaggcagagcttaatgtta taatgcattccctaggccacaacccaacggacaatgagctgtatgaaatattaacagaaagtggaccagaggggtacgaa aggattgattttaccgaatttcttctgatgatggcaaagcgcatgcgcagtggtgcaactgaggacgagttaatggcagc cttccgggcatttgatgatgacggggatggctttataacatctaaagaactacgacaggccttaattaaagtgggagaac acatgtcagagaaagaaattatagatatgatcaaagaggccgacttagatggtgacggaatggtgaattatcaagagttt gttcaaatggtcagatcttctgggaagaagtag |
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Protein
| Protein ID | pfu_aug2.0_1779.1_31893.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1779.1_31893.t1 MPGHIPSMRISSLEPDGLQVEELSQEQVQDFKNAFDRFDENGDGTITKAELNVIMHSLGHNPTDNELYEILTESGPEGYE RIDFTEFLLMMAKRMRSGATEDELMAAFRAFDDDGDGFITSKELRQALIKVGEHMSEKEIIDMIKEADLDGDGMVNYQEF VQMVRSSGKK |
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