Gene
| Gene Model ID | pfu_aug2.0_179.1_30348 |
|---|---|
| Locus | scaffold179.1 : 14794 ... 30175 : - |
| To GenomeBrowser | scaffold179.1:14794..30175 |
| Genes list of scaffold | scaffold179.1 |
| Synonym | pfu_aug1.0_23993.1_62270 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_179.1_30348.t1 | 1 | 1 | CTP_transf_1 | 1 | 327 | 0.0 | 279.9 | 0.0 | 0.0 | 279.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_179.1_30348.t1 | gi|676474102|ref|XP_009060033.1| | hypothetical protein LOTGIDRAFT_106077, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_179.1_30348.t1 | gi|524879941|ref|XP_005096640.1| | PREDICTED: phosphatidate cytidylyltransferase, photoreceptor-specific-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_179.1_30348.t1 | gi|573877219|ref|XP_006626862.1| | PREDICTED: phosphatidate cytidylyltransferase 1-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_179.1_30348.t1 | gi|262272069|ref|NP_001160145.1| | phosphatidate cytidylyltransferase 2 [Sus scrofa] | 0.0 |
| pfu_aug2.0_179.1_30348.t1 | gi|524929022|ref|XP_005068722.1| | PREDICTED: phosphatidate cytidylyltransferase 2 [Mesocricetus auratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_179.1_30348.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_179.1_30348.t1 atgattttcctgtttgcttttctcatctatctgggaccgctggctttggttctagttatatttgcaatacagatcaaatg ttttcacgagatcatcaccataggttacatggtatacaagtcttttgacctgccatggttccgaactctgagctggtatt tcctcttcacatctaattacttcttctatggagaaagtcttatacagtattttagcttattacttcataaacaggaatta ttgcgtcttttagtccagtatcatcggttcatctctttctcgttatacattgccggttttgttggatttgtgttcagtct agtcaaaaagcattacttaaagcagtttacgctgtttggatggactcatgtgactttgttaattgttgttacacagtctc atctcatcattcacaatgtgtttgaaggacttgtatggttactggtaccagtttccatgataatctgtaatgacatcatg gcttacatgtttgggttcttctttggaaagacacccctcatcaaattatccccaaagaagacatgggagggatttatagg cggggccctgtctacagtcctctttggatttttgttgtcatatgcccttgtgcagtatgattactttgtatgtcccatct catatgatgaagcccgagacacactatctatggagtgtgagagacatccagtatttattctgactgagtatacactacct ggtgtctggcagaaactaatgctcttgatcggtatttctttgaagacagtccgagtgtatccgttcattctacactctat atccatgtccatgtttgcctctgtaatcggtccatttggaggtttctttgccagtggatttaagagagcatttaaaataa aggactttggagacacaatccctggacatggtggtataatggacagatttgattgtcaattcctgatggcaacatttgtt catgtatactatgctagttttataagggcaccaaatgctgctaagatagtccagtctgtgttaattctgccacctgaaga acaactgtacgtcttcaacacgctgagagataaactcactgccaggggtatattacccggtaataccgcaggttga |
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Protein
| Protein ID | pfu_aug2.0_179.1_30348.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_179.1_30348.t1 MIFLFAFLIYLGPLALVLVIFAIQIKCFHEIITIGYMVYKSFDLPWFRTLSWYFLFTSNYFFYGESLIQYFSLLLHKQEL LRLLVQYHRFISFSLYIAGFVGFVFSLVKKHYLKQFTLFGWTHVTLLIVVTQSHLIIHNVFEGLVWLLVPVSMIICNDIM AYMFGFFFGKTPLIKLSPKKTWEGFIGGALSTVLFGFLLSYALVQYDYFVCPISYDEARDTLSMECERHPVFILTEYTLP GVWQKLMLLIGISLKTVRVYPFILHSISMSMFASVIGPFGGFFASGFKRAFKIKDFGDTIPGHGGIMDRFDCQFLMATFV HVYYASFIRAPNAAKIVQSVLILPPEEQLYVFNTLRDKLTARGILPGNTAG |
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