Gene
| Gene Model ID | pfu_aug2.0_179.1_30349 |
|---|---|
| Locus | scaffold179.1 : 38396 ... 62479 : + |
| To GenomeBrowser | scaffold179.1:38396..62479 |
| Genes list of scaffold | scaffold179.1 |
| Synonym | pfu_aug1.0_15021.1_25367 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_179.1_30349.t1 | 2 | 1 | DUF607 | 83 | 227 | 0.0 | 167.4 | 6.2e-22 | 9.2e-18 | 64.7 |
| pfu_aug2.0_179.1_30349.t1 | 2 | 2 | DUF607 | 285 | 353 | 0.0 | 167.4 | 2.8e-33 | 4.2e-29 | 101.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_179.1_30349.t1 | gi|260830714|ref|XP_002610305.1| | hypothetical protein BRAFLDRAFT_254991 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_179.1_30349.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_179.1_30349.t1 atggcttcctctcgacttctgtttgttgtcaggcaagaattattacagcaactgcatccttttagaggaaagcaatcgtt taatagacacaagataagcagagtgttttgtcaatgcagttattataatacaggcttatcaaacgaagctgcagtaacaa tacgtgatggtctaccagttttcacagtgcctttgccatctcgtcatgagaaatgtgaatttacgctcaaacccatatcc aacacggtcggggacttcttacaatacatggaggaggaagatgggggcattgatagggctgttatatacacagctgatgg tgtgcggattgctaaatcaacaacaatagatgtactgctgaaaacagactttaaacttgttatcaacaacacagaatatg acatagctgttcccaaaggcataggttcctttgacagtgaggaagttaaggatgtatctgaggtgaaatctttgataggg aaactttactcaactttgaatgtagaggaatatcaaatacaggaggagaagaaactcctagctcaacttgaagaacttaa actgcagatagctccaatggaaaagatgaagcatgagttagatttgaaggctaagaagcgtacaacattcctatcttgga ctggactgggattgatgggattgcagttcggtttcttagcccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtcttacatggtgggagtactcatggg atatcatggaacctgtgacctactttgtcacctacggtacaactatggccatgtttgcttactttgtactgaccaaacag gagtacaactttgttgaggtaaaagacagacagcatctattgtctctacacggcaatgccaagaagaataactttgatat acagaagtacaatgatctgcgggaagctattaccaaattagactttctatctatagaaatgttagtatcagaagaatgct tgctcaatagatggttaattttagcttatatggatgaattcagggcctgtacagtaacatcacatcctggacatctaaat ttttga |
|
Protein
| Protein ID | pfu_aug2.0_179.1_30349.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_179.1_30349.t1 MASSRLLFVVRQELLQQLHPFRGKQSFNRHKISRVFCQCSYYNTGLSNEAAVTIRDGLPVFTVPLPSRHEKCEFTLKPIS NTVGDFLQYMEEEDGGIDRAVIYTADGVRIAKSTTIDVLLKTDFKLVINNTEYDIAVPKGIGSFDSEEVKDVSEVKSLIG KLYSTLNVEEYQIQEEKKLLAQLEELKLQIAPMEKMKHELDLKAKKRTTFLSWTGLGLMGLQFGFLAXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTWWEYSWDIMEPVTYFVTYGTTMAMFAYFVLTKQ EYNFVEVKDRQHLLSLHGNAKKNNFDIQKYNDLREAITKLDFLSIEMLVSEECLLNRWLILAYMDEFRACTVTSHPGHLN F |
|