Gene
| Gene Model ID | pfu_aug2.0_179.1_30352 |
|---|---|
| Locus | scaffold179.1 : 127556 ... 132061 : + |
| To GenomeBrowser | scaffold179.1:127556..132061 |
| Genes list of scaffold | scaffold179.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_179.1_30352.t1 | 1 | 1 | RTP801_C | 68 | 189 | 1.4e-28 | 98.8 | 3.5e-32 | 2.6e-28 | 98.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_179.1_30352.t1 | gi|676429147|ref|XP_009045505.1| | hypothetical protein LOTGIDRAFT_110160 [Lottia gigantea] | 6.02558e-44 |
| pfu_aug2.0_179.1_30352.t1 | gi|524892558|ref|XP_005102806.1| | PREDICTED: DNA damage-inducible transcript 4-like protein-like [Aplysia californica] | 4.0e-33 |
| pfu_aug2.0_179.1_30352.t1 | gi|291239833|ref|XP_002739827.1| | PREDICTED: protein scylla-like [Saccoglossus kowalevskii] | 1.0e-30 |
| pfu_aug2.0_179.1_30352.t1 | gi|662191659|ref|XP_008468653.1| | PREDICTED: protein charybde-like [Diaphorina citri] | 4.0e-23 |
| pfu_aug2.0_179.1_30352.t1 | gi|242006960|ref|XP_002424310.1| | conserved hypothetical protein [Pediculus humanus corporis] | 7.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_179.1_30352.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_179.1_30352.t1 atgcacaagataaaaagagtgctcggacttatgaagtcatctcctgtgtctttagtcgatatttttgaaaataatcccca gtgtgtaaaatataatggtgatattgattgtcagacaaatggtgctaatagctatggaacctttgaagaggctgctgagc ttacccagtctaaacagctgtcaaatcgcttgatggatgcactgcgcaatgttcgagagaaacttttgcactgtgaatta cttattccatgtggactcatcatgaaagtgtctgaggatattgtacgcatgtcccacagtgagccatgtggtattcgagg atgtatcctgtatatcaacttagaagaaaaggacaaatgtcaacatttaatcaaattgcccttagatcctagtactgttg ccacttttgaacttcatctaactctgaaggaagacgtgagaagtgtttgtcatatcaagaaattttttctgacagtgagt ggttgtcttcaggaaaatccgtcctcctggaacttcagctggagaatcctttgttcaggattcactctggagaagaagaa gctgtacagactgcagtcctga |
|
Protein
| Protein ID | pfu_aug2.0_179.1_30352.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_179.1_30352.t1 MHKIKRVLGLMKSSPVSLVDIFENNPQCVKYNGDIDCQTNGANSYGTFEEAAELTQSKQLSNRLMDALRNVREKLLHCEL LIPCGLIMKVSEDIVRMSHSEPCGIRGCILYINLEEKDKCQHLIKLPLDPSTVATFELHLTLKEDVRSVCHIKKFFLTVS GCLQENPSSWNFSWRILCSGFTLEKKKLYRLQS |
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