Gene
| Gene Model ID | pfu_aug2.0_179.1_30362 |
|---|---|
| Locus | scaffold179.1 : 265909 ... 269011 : + |
| To GenomeBrowser | scaffold179.1:265909..269011 |
| Genes list of scaffold | scaffold179.1 |
| Synonym | pfu_aug1.0_43715.1_55908 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_179.1_30362.t1 | 1 | 1 | THAP | 5 | 75 | 2.0e-10 | 40.6 | 4.4e-13 | 6.0e-10 | 39.1 |
| pfu_aug2.0_179.1_30362.t1 | 2 | 1 | DDE_Tnp_4 | 75 | 104 | 7.00649e-45 | 152.5 | 3.4 | 4600.0 | -3.0 |
| pfu_aug2.0_179.1_30362.t1 | 2 | 1 | HTH_Tnp_4 | 104 | 117 | 2.6e-09 | 36.4 | 2.9 | 3900.0 | -2.6 |
| pfu_aug2.0_179.1_30362.t1 | 2 | 2 | HTH_Tnp_4 | 293 | 343 | 2.6e-09 | 36.4 | 5.1e-12 | 6.9e-09 | 35.1 |
| pfu_aug2.0_179.1_30362.t1 | 1 | 1 | DDE_Tnp_1 | 369 | 526 | 4.0e-06 | 26.5 | 7.4e-09 | 9.9e-06 | 25.2 |
| pfu_aug2.0_179.1_30362.t1 | 2 | 2 | DDE_Tnp_4 | 374 | 538 | 7.00649e-45 | 152.5 | 0.0 | 1.68156e-44 | 151.2 |
Transcript
| Transcript ID | pfu_aug2.0_179.1_30362.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_179.1_30362.t1 atgccacacgtttattgtgtggccattaactgcaaatcggacagcaggaagaaagagcagggtatagagtttttcccttt gccccaaaaacagagcacgttaaaaaattggctgaaattacttcggagagacggactagaggagaaagtaaattccacca ggtccaaggaccgtgattctagacatttagttgtatgttcaaaacatttcatcgatgcaaaacctaccaaagaaaatcct tatcctaccatttttgactttaataccagagaatctaaaaagaggaaaacagtaaattccgtaacaggacgtactactgt gtgcaatgtcagtgacgaggctgagaatctgtatttacactcaaaatccaaaataatccgtcttgtaaagagttctgttg ttcgtgagtctgtctgctatccctttgtggcaggagagtctgatgtcccagagataagtaatgagactgctgatgaagtg cctgtagttgagcaaagtgttcaacatgttcaagaacaagtcggtgaccacaaagactatgcatgtaaggatccatcctt gaaatatggcaaatttgaagctttgcaggaagaatgtgaacaacttaaagaagatgtggcaaatctgaaggctgaaaatg tttcactgaaaaaacaactcgaagagtcatctgtgaagaaagaatttgtcaaggtcatattaaagaatgacaaaaatgtt cgacattttcttggtttaccgtcacttttatttttcatgcaatttattgaatttgtctccaatttgtatggaaaaatatc attttggaaaggttccaaaagaggtgtagagaagaaatggcaacacaaaaagcagatgaaaccaggaattaaaacacata aactgtcaatcaaggaggagttcattcttatcatgttgaagtttcgattaggtctcgacaatgccactttgtcagagatc tttgatgtgtcagttggtcaagtttcaactctttttattacatggatgaatttcttgagtcagatcttggagtgtgttat aaaatggccatcaaaagaaaaagtaaggaaacacatgcctgtttgcttcaaattgaagtacccagagactgtggcaatta ttgactgtacggagatgtttgtacaaaaaccaaaaaactcaggagcacaagcaagcacgtggagtaattacaaaactaaa aacactttgaaagcattggtggcaatacagccaaatggagcatttagttttgtttctaaattttggagtgggaatatttc agacaggaaaatcacagaacaaagtgggttcctcgataaagttaaaaaaggtgatcacataatggcagacagggggttcc agatccgagatttacttacagctaagggagcatatcttaatatgcctcccttcaccagagcttcaaacaaaggcaaaggg cgaactctaacatctaaggaaattactgaaacaaggaagattgcatccgtcaggattcatgttgaaagggccattcagag actgaaaacatttaaacttctaggtcacacattacctatcaatatgaaagacatttcgtcagaaatgttgattgtggctg cagcattttgtaatttcctgccaccacttgtgaaaaaatacaaaagttaa |
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Protein
| Protein ID | pfu_aug2.0_179.1_30362.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_179.1_30362.t1 MPHVYCVAINCKSDSRKKEQGIEFFPLPQKQSTLKNWLKLLRRDGLEEKVNSTRSKDRDSRHLVVCSKHFIDAKPTKENP YPTIFDFNTRESKKRKTVNSVTGRTTVCNVSDEAENLYLHSKSKIIRLVKSSVVRESVCYPFVAGESDVPEISNETADEV PVVEQSVQHVQEQVGDHKDYACKDPSLKYGKFEALQEECEQLKEDVANLKAENVSLKKQLEESSVKKEFVKVILKNDKNV RHFLGLPSLLFFMQFIEFVSNLYGKISFWKGSKRGVEKKWQHKKQMKPGIKTHKLSIKEEFILIMLKFRLGLDNATLSEI FDVSVGQVSTLFITWMNFLSQILECVIKWPSKEKVRKHMPVCFKLKYPETVAIIDCTEMFVQKPKNSGAQASTWSNYKTK NTLKALVAIQPNGAFSFVSKFWSGNISDRKITEQSGFLDKVKKGDHIMADRGFQIRDLLTAKGAYLNMPPFTRASNKGKG RTLTSKEITETRKIASVRIHVERAIQRLKTFKLLGHTLPINMKDISSEMLIVAAAFCNFLPPLVKKYKS |
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