Gene
| Gene Model ID | pfu_aug2.0_179.1_30363 |
|---|---|
| Locus | scaffold179.1 : 269027 ... 278208 : - |
| To GenomeBrowser | scaffold179.1:269027..278208 |
| Genes list of scaffold | scaffold179.1 |
| Synonym | pfu_aug1.0_1837.1_08141 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_179.1_30363.t1 | 2 | 1 | Herpes_alk_exo | 291 | 424 | 6.2e-19 | 67.8 | 9.7e-12 | 2.4e-08 | 32.8 |
| pfu_aug2.0_179.1_30363.t1 | 2 | 1 | Spore_GerQ | 349 | 388 | 4.5e-06 | 26.2 | 4.9e-05 | 0.12 | 12.0 |
| pfu_aug2.0_179.1_30363.t1 | 2 | 1 | YqaJ | 369 | 482 | 4.6e-37 | 127.3 | 1.8e-19 | 4.5e-16 | 59.1 |
| pfu_aug2.0_179.1_30363.t1 | 2 | 2 | Herpes_alk_exo | 529 | 662 | 6.2e-19 | 67.8 | 9.9e-12 | 2.4e-08 | 32.8 |
| pfu_aug2.0_179.1_30363.t1 | 2 | 2 | Spore_GerQ | 587 | 626 | 4.5e-06 | 26.2 | 4.9e-05 | 0.12 | 12.0 |
| pfu_aug2.0_179.1_30363.t1 | 2 | 2 | YqaJ | 607 | 760 | 4.6e-37 | 127.3 | 1.5e-21 | 3.7e-18 | 65.9 |
Transcript
| Transcript ID | pfu_aug2.0_179.1_30363.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_179.1_30363.t1 atggagcatatccaggatggtaggatccagggtggagcagatccaggattgcatgatccagggtggggcagatccagaat tggtaggatccagggtgggacagatccaggattggtaggatccagggtgggacagatccagggtggggcagatccaggat tggtaggacccaggatgatgaaaatcaggtactgtaagacccagggtagggcagatccaggattgattaaagataaagag gatcctctcctggcatcaaaaaatcgccgatctgtcaaaggtcacacatttcctgatccatttgactccattaattcaat tcaatggtcagacaacttgtcaactttgccaccaattgatttctttgatactacaaccttcttattgtcttactgtggct ggacaaatgaccgagtaaagagaagaaaacttgacaacagttaccagttacactgcaatggccatgtacatagtgtacaa atatcaaacttagaacacgaaatggtctatgtaagggcaagatgtgtgcctgaaacaagacaatcttccgagtcctacaa gctatgggtgttgattgagaagactggttgtatccattcagcagaatgctcgtgtgttgcaggcgatggatcttgtaagc atgttgtcgcgctactatacggattgaatgaagtcgtatctaaattcgaggacagaaatgatattggtgtgacggatgtt gcagcttattggtctaaaccaaaaagagtatgcagacctgttgaagtagaaaatctggacataaggatagacaccagtac cccattaaaaaggaaaccatctgctgctgctggctacactcctttgaaatatcttgataagcctaaaattgagaaagaca ttaagaaattgctgagggacaccaagaccaatgctgttgctctttatacactttcagactctgaggaagactgtagtggt gatgaaattgaaattcaaagctatcctcttaacattattgacttgataaataggtatggggtagagaaagtgtacgaaaa tgctaaccaatcatacatagagaatgtctgtgaacttactaaaggtcaatccgataatgacatgtggtactatcagcgaa aaggtaggttgacagcatcaaactttcacagtgccatacactacaagggagacaatcctgataattatattgtcaaaact gtcctagggaaatatcactttacatctgaagccacaagatatggtaaattttctgaaccactggctagagagaaatatgg ggctaaaatgaaacagtctcatgtatctttttattgtaaggaaactggagtatttgtatacgagaaattcccattcattg ctgcttcaccagatggcattgtaaactgtaaatgttgttcacaaggccttgttgagataaaatgcccttttcaaatgaaa aatgaaatgccacaagatgccatggcaaaaaattcatcatgtgtttggaaagatggtaagatagacaccagtaccccatt aaaaaggaaaccatctgctgctgctggctacactcctttgaaatatcttgataagcctaaaattgagaaagacattaaga aattgctgagggacaccaagaccaatgctgttgctctttatacactttcagactctgaggaagactgtagtggtgatgaa attgaaattcaaagctatcctcttaacattattgacttgataaataggtatggggtagagaaagtgtacgaaaatgctaa ccaatcatacatagagaatgtctgtgaacttactaaaggtcaatccgataatgacatgtggtactatcagcgaaaaggta ggttgacagcatcaaactttcacagtgccatacactacaagggagacaatcctgataattatattgtcaaaactgtccta gggaaatatcactttacatctgaagccacaagatatggtaaattttctgaaccactggctagagagaaatatggggctaa aatgaaacagtctcatgtatctttttattgtaaggaaactggagtatttgtatacgagaaattcccattcattgctgctt caccagatggcattgtaaactgtaaatgttgttcacaaggccttgttgagataaaatgcccttttcaaatgaaaaatgaa atgccacaagatgccatggcaaaaaattcatcatgtgtttggaaagatggtaagtatgtcctcaaaagagacctatcatc accattttatgtgcaaattttgggtcaaatggcaattctaaaattaccattttgtgattttgtcatttacacaaataaag gcatgaatgtcgagaggataccatacaatccaactctctgggaagaaatgttcacaaagatcaaggacttctataacaaa ttcattcttcctattttaaactag |
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Protein
| Protein ID | pfu_aug2.0_179.1_30363.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_179.1_30363.t1 MEHIQDGRIQGGADPGLHDPGWGRSRIGRIQGGTDPGLVGSRVGQIQGGADPGLVGPRMMKIRYCKTQGRADPGLIKDKE DPLLASKNRRSVKGHTFPDPFDSINSIQWSDNLSTLPPIDFFDTTTFLLSYCGWTNDRVKRRKLDNSYQLHCNGHVHSVQ ISNLEHEMVYVRARCVPETRQSSESYKLWVLIEKTGCIHSAECSCVAGDGSCKHVVALLYGLNEVVSKFEDRNDIGVTDV AAYWSKPKRVCRPVEVENLDIRIDTSTPLKRKPSAAAGYTPLKYLDKPKIEKDIKKLLRDTKTNAVALYTLSDSEEDCSG DEIEIQSYPLNIIDLINRYGVEKVYENANQSYIENVCELTKGQSDNDMWYYQRKGRLTASNFHSAIHYKGDNPDNYIVKT VLGKYHFTSEATRYGKFSEPLAREKYGAKMKQSHVSFYCKETGVFVYEKFPFIAASPDGIVNCKCCSQGLVEIKCPFQMK NEMPQDAMAKNSSCVWKDGKIDTSTPLKRKPSAAAGYTPLKYLDKPKIEKDIKKLLRDTKTNAVALYTLSDSEEDCSGDE IEIQSYPLNIIDLINRYGVEKVYENANQSYIENVCELTKGQSDNDMWYYQRKGRLTASNFHSAIHYKGDNPDNYIVKTVL GKYHFTSEATRYGKFSEPLAREKYGAKMKQSHVSFYCKETGVFVYEKFPFIAASPDGIVNCKCCSQGLVEIKCPFQMKNE MPQDAMAKNSSCVWKDGKYVLKRDLSSPFYVQILGQMAILKLPFCDFVIYTNKGMNVERIPYNPTLWEEMFTKIKDFYNK FILPILN |
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