Gene
| Gene Model ID | pfu_aug2.0_179.1_30365 |
|---|---|
| Locus | scaffold179.1 : 313625 ... 329888 : - |
| To GenomeBrowser | scaffold179.1:313625..329888 |
| Genes list of scaffold | scaffold179.1 |
| Synonym | pfu_aug1.0_38357.1_70270 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_179.1_30365.t2 | 1 | 1 | EMP70 | 53 | 559 | 0.0 | 558.4 | 0.0 | 0.0 | 555.4 |
Transcript
| Transcript ID | pfu_aug2.0_179.1_30365.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_179.1_30365.t1 atgaaatatccgataaatttaattcttaccctttcattcctccttctcctcgatttaagatacagcagtgcagacgagca cgatcactcgtatgaggataatgaggaggtggtgctatggatgaacacagtgggaccataccataacagacaagaaactt actcctacttctccctacctttttgtgctggtccaaagcaaagcataggacattaccatgagaccctgggtgaggcccta caaggtacagagttggagttcagcggtctggacattgatttcaaaggtgatttgcctaagacagaatattgtagcataga actgtcagaagagaagtatcaagcctttgtgtatgctgtgaagaatcattactggtaccaaatgtatattgatgacctgc caatatggggtatagtgggagagatcagtgacggagattactatgtgtggactcacaaaagatttgatttgggccacaac aacaatcagattgtggacgtcaatcttaccagtgaagccaagaaaaaactggaaccaaatgcaaaaattgcatttacata cgaggtccattgggttgcgtcatccattaagtttgacaagagatttgacaagtacttggaccccaatttctttcaacaca gaattcactggttcagcatctttaactcgttcatgatggtgatattcctggtgggtttggtcagtatgatcttaatgagg acactgaggaaagactacgcacgctacagcaaggaagaggacctcgatgacatggaaaaggatcttggtgacgagtatgg ttggaagcaggttcatggggatgttttcagaccagcatctaatcccatgttattctcagcactcataggtacaggttacc acatatcagtggttactctatgtgtcatcgtctttgccatactgggcgatctctatactgagcgtggatctcttctgagt acagcaatatttgtttttgcggccacttcccctgttaatggttactttggcggcagtttgtatgcaaggatgggaggtaa ggtatggattaagcagatgttattgagtgcttttatgctgccagcaatggtttgtggtacagctttcttcatcaacttta ttgccatatactatcatgcctccagagctattccattcggtacaatggtggcagtgacgtgtatatgcatatttgtgatt ttacctctaacactcgtgggaactgtacttggacgtaatcttgcagggcaacctaactatccctgccgagtcaatgctgt tccaagacctatcccagagaaaaaatggttcatggaaccagctgtgattatagtgttaggaggaatattgccgttcggtt ctatcttcattgaaatgtacttcattttcacctcattctgggcctacaagatatattatgtgtatggattcatgctactt gtgtttgttatattgacaatagtaactgtgtgtgtcaccatcgtgtgtacttatttcctgctgaatgcagaggactacag atggcagtggacaagcttcctgtcagcagcttcaacagcaggatatgtttatctatattcattttattatttcttcttca aaactaaaatgtatggattatttcaaacaacattttacttcgggtacatggcattattcagcttagccctaggtttaatg tgcggtacgtttggttatatagggacaagttactttgtcagaaaaatatattccactgtgaagattgactga |
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| Transcript ID | pfu_aug2.0_179.1_30365.t2 |
| Definition | - |
>pfu_aug2.0_179.1_30365.t2 atgaaatatccgataaatttaattcttaccctttcattcctccttctcctcgatttaagatacagcagtgcagacgagca cgatcactcgtatgaggataatgaggaggtggtgctatggatgaacacagtgggaccataccataacagacaagaaactt actcctacttctccctacctttttgtgctggtccaaagcaaagcataggacattaccatgagaccctgggtgaggcccta caaggtacagagttggagttcagcggtctggacattgatttcaaaggtgatttgcctaagacagaatattgtagcataga actgtcagaagagaagtatcaagcctttgtgtatgctgtgaagaatcattactggtaccaaatgtatattgatgacctgc caatatggggtatagtgggagagatcagtgacggagattactatgtgtggactcacaaaagatttgatttgggccacaac aacaatcagattgtggacgtcaatcttaccagtgaagccaagaaaaaactggaaccaaatgcaaaaattgcatttacata cgaggtccattgggttgcgtcatccattaagtttgacaagagatttgacaagtacttggaccccaatttctttcaacaca gaattcactggttcagcatctttaactcgttcatgatggtgatattcctggtgggtttggtcagtatgatcttaatgagg acactgaggaaagactacgcacgctacagcaaggaagaggacctcgatgacatggttaccntgaggaaagactacgcacg ctacagcaaggaagaggacctcgatgacatggaaaaggatcttggtgacgagtatggttggaagcaggttcatggggatg ttttcagaccagcatctaatcccatgttattctcagcactcataggtacaggttaccacatatcagtggttactctatgt gtcatcgtctttgccatactgggcgatctctatactgagcgtggatctcttctgagtacagcaatatttgtttttgcggc cacttcccctgttaatggttactttggcggcagtttgtatgcaaggatgggaggtaaggtatggattaagcagatgttat tgagtgcttttatgctgccagcaatggtttgtggtacagctttcttcatcaactttattgccatatactatcatgcctcc agagctattccattcggtacaatggtggcagtgacgtgtatatgcatatttgtgattttacctctaacactcgtgggaac tgtacttggacgtaatcttgcagggcaacctaactatccctgccgagtcaatgctgttccaagacctatcccagagaaaa aatggttcatggaaccagctgtgattatagtgttaggaggaatattgccgttcggttctatcttcattgaaatgtacttc attttcacctcattctgggcctacaagatatattatgtgtatggattcatgctacttgtgtttgttatattgacaatagt aactgtgtgtgtcaccatcgtgtgtacttatttcctgctgaatgcagaggactacagatggcagtggacaagcttcctgt cagcagcttcaacagcaggatatgtttatctatattcattttattatttcttcttcaaaactaaaatgtatggattattt caaacaacattttacttcgggtacatggcattattcagcttagccctaggtttaatgtgcggtacgtttggttatatagg gacaagttactttgtcagaaaaatatattccactgtgaagattgactga |
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Protein
| Protein ID | pfu_aug2.0_179.1_30365.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_179.1_30365.t1 MKYPINLILTLSFLLLLDLRYSSADEHDHSYEDNEEVVLWMNTVGPYHNRQETYSYFSLPFCAGPKQSIGHYHETLGEAL QGTELEFSGLDIDFKGDLPKTEYCSIELSEEKYQAFVYAVKNHYWYQMYIDDLPIWGIVGEISDGDYYVWTHKRFDLGHN NNQIVDVNLTSEAKKKLEPNAKIAFTYEVHWVASSIKFDKRFDKYLDPNFFQHRIHWFSIFNSFMMVIFLVGLVSMILMR TLRKDYARYSKEEDLDDMEKDLGDEYGWKQVHGDVFRPASNPMLFSALIGTGYHISVVTLCVIVFAILGDLYTERGSLLS TAIFVFAATSPVNGYFGGSLYARMGGKVWIKQMLLSAFMLPAMVCGTAFFINFIAIYYHASRAIPFGTMVAVTCICIFVI LPLTLVGTVLGRNLAGQPNYPCRVNAVPRPIPEKKWFMEPAVIIVLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMLL VFVILTIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAGYVYLYSFYYFFFKTKMYGLFQTTFYFGYMALFSLALGLM CGTFGYIGTSYFVRKIYSTVKID |
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| Protein ID | pfu_aug2.0_179.1_30365.t2 |
| Definition | - |
>pfu_aug2.0_179.1_30365.t2 MKYPINLILTLSFLLLLDLRYSSADEHDHSYEDNEEVVLWMNTVGPYHNRQETYSYFSLPFCAGPKQSIGHYHETLGEAL QGTELEFSGLDIDFKGDLPKTEYCSIELSEEKYQAFVYAVKNHYWYQMYIDDLPIWGIVGEISDGDYYVWTHKRFDLGHN NNQIVDVNLTSEAKKKLEPNAKIAFTYEVHWVASSIKFDKRFDKYLDPNFFQHRIHWFSIFNSFMMVIFLVGLVSMILMR TLRKDYARYSKEEDLDDMVTXRKDYARYSKEEDLDDMEKDLGDEYGWKQVHGDVFRPASNPMLFSALIGTGYHISVVTLC VIVFAILGDLYTERGSLLSTAIFVFAATSPVNGYFGGSLYARMGGKVWIKQMLLSAFMLPAMVCGTAFFINFIAIYYHAS RAIPFGTMVAVTCICIFVILPLTLVGTVLGRNLAGQPNYPCRVNAVPRPIPEKKWFMEPAVIIVLGGILPFGSIFIEMYF IFTSFWAYKIYYVYGFMLLVFVILTIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAGYVYLYSFYYFFFKTKMYGLF QTTFYFGYMALFSLALGLMCGTFGYIGTSYFVRKIYSTVKID |
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