Gene
| Gene Model ID | pfu_aug2.0_179.1_30368 |
|---|---|
| Locus | scaffold179.1 : 389558 ... 393152 : - |
| To GenomeBrowser | scaffold179.1:389558..393152 |
| Genes list of scaffold | scaffold179.1 |
| Synonym | pfu_aug1.0_5727.1_45285 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_179.1_30368.t1 | 3 | 1 | 7TM_GPCR_Srx | 52 | 83 | 2.9e-06 | 26.6 | 0.07 | 340.0 | 0.1 |
| pfu_aug2.0_179.1_30368.t1 | 2 | 1 | 7tm_1 | 64 | 84 | 0.0 | 222.5 | 0.15 | 760.0 | -1.0 |
| pfu_aug2.0_179.1_30368.t1 | 3 | 2 | 7TM_GPCR_Srx | 81 | 269 | 2.9e-06 | 26.6 | 5.8e-10 | 2.9e-06 | 26.6 |
| pfu_aug2.0_179.1_30368.t1 | 2 | 1 | 7TM_GPCR_Srsx | 86 | 278 | 4.4e-10 | 39.1 | 1.1e-11 | 5.5e-08 | 32.2 |
| pfu_aug2.0_179.1_30368.t1 | 2 | 2 | 7tm_1 | 89 | 527 | 0.0 | 222.5 | 0.0 | 0.0 | 222.5 |
| pfu_aug2.0_179.1_30368.t1 | 2 | 2 | 7TM_GPCR_Srsx | 468 | 540 | 4.4e-10 | 39.1 | 1.4e-05 | 0.068 | 12.3 |
| pfu_aug2.0_179.1_30368.t1 | 3 | 3 | 7TM_GPCR_Srx | 476 | 520 | 2.9e-06 | 26.6 | 0.33 | 1600.0 | -2.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_179.1_30368.t1 | gi|676487361|ref|XP_009064268.1| | hypothetical protein LOTGIDRAFT_130962 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_179.1_30368.t1 | gi|524900600|ref|XP_005106719.1| | PREDICTED: octopamine receptor 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_179.1_30368.t1 | gi|684371198|ref|XP_009163699.1| | hypothetical protein T265_01409 [Opisthorchis viverrini] | 0.0 |
| pfu_aug2.0_179.1_30368.t1 | gi|195172881|ref|XP_002027224.1| | GL25423 [Drosophila persimilis] | 0.0 |
| pfu_aug2.0_179.1_30368.t1 | gi|198463614|ref|XP_001352884.2| | GA20386 [Drosophila pseudoobscura pseudoobscura] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_179.1_30368.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_179.1_30368.t1 atgtcagtgattaatttatccctaccgaataatgaacacgagttttattacggaatgaaggagggaaggatgcagtatcg cgaacataacgacacaagtggacacagtctattctatatggatcactcacacgataatccgtgttattcaaacagtacga tatgggcactgacttcagatatttgctccatcaatttctcgtccttcgttgcttttgtgatagtcgcaattttgcttgct gtgataacgttgtggacaatatttggaaatattttagtatgggtggctttgtacaaattcccaaacctacggtcaatgtc gaactgtttgattggaaaccttgccgtcagtgatttggtccttgcgatgaccgttctaccgatttcggcgggacacgacc ttctaggatactggatattcggcaaaaccttgtgtatcatatggctttgcatggatgttttatattgcaccgcgtctata tggggtttgtgtacaatagctgtggaccgattttcggcgacggtattcccggtgtggtattacgagaggaaatctcctct aagagcattggtttatattatctttgtatggttattttccattatcgtgtcacttgcgccttttattggatggcgggata tgataccgacactgtatagatttaacacgaaaataaatagatacgaatgtgttctttttcagacggagggatacgtggtg tattcggccatgggttccttcgtgatacccatcattcttatgacgttcttgtatgtgcgaattttcttcgtattgagaca acgatcgaaaacattaaatccgaaacgacgaaaattgagatattctttcgaaacggatttcgatagttgcgcaatacacg aagtgagcagtcagcttgaccttgcaaacccagtcactatgacggacaaggcgacgcaggttagtcctgtttctaagaaa gaaaacgataagcattcaaaacaaacctgtggtgagcgaaatgagagtgaaaggaaccatcaaccgaatccaagcgaaac gtatggaacgcataattcaaactcaacacctactgatctagcggatattatctgccggaatcgacaagacctacggaatt ctgatgagagaattccttgtttacctgaaaagtctatctcaaaatcatcaacgtcaattcaaaatgggcacagtcactat ctatcagtgacgggtaccaccgacgcgcctgacgaaaagacgtctatctcaccgacacgttccttgcgtagtattggcgg gggatgtattagaaaaggatcgcaaaaaatgaatgaaaatggaaggaattcctcgcttcgtgtcaagggcagatccaata gacataaacaatcaggtattaaaactagatacgagatacgagaacaaagagctacaaagagaatggccattgttatggcc tgctttctcgtgtgttggatgcctttcctttttatgtacataattagaagcttctgtgtctcatgtgatcttaatgctca tatccaagcttctattatatggcttggctacgctaattcagggatcaatcccatcctctatacactgttcaacgatgatt tcagaaaagctttcaaactcattttgggatttaaatccaaacaaaaacgtcctgcatag |
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Protein
| Protein ID | pfu_aug2.0_179.1_30368.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_179.1_30368.t1 MSVINLSLPNNEHEFYYGMKEGRMQYREHNDTSGHSLFYMDHSHDNPCYSNSTIWALTSDICSINFSSFVAFVIVAILLA VITLWTIFGNILVWVALYKFPNLRSMSNCLIGNLAVSDLVLAMTVLPISAGHDLLGYWIFGKTLCIIWLCMDVLYCTASI WGLCTIAVDRFSATVFPVWYYERKSPLRALVYIIFVWLFSIIVSLAPFIGWRDMIPTLYRFNTKINRYECVLFQTEGYVV YSAMGSFVIPIILMTFLYVRIFFVLRQRSKTLNPKRRKLRYSFETDFDSCAIHEVSSQLDLANPVTMTDKATQVSPVSKK ENDKHSKQTCGERNESERNHQPNPSETYGTHNSNSTPTDLADIICRNRQDLRNSDERIPCLPEKSISKSSTSIQNGHSHY LSVTGTTDAPDEKTSISPTRSLRSIGGGCIRKGSQKMNENGRNSSLRVKGRSNRHKQSGIKTRYEIREQRATKRMAIVMA CFLVCWMPFLFMYIIRSFCVSCDLNAHIQASIIWLGYANSGINPILYTLFNDDFRKAFKLILGFKSKQKRPA |
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