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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1790.1_01833
Locus scaffold1790.1 : 33706 ... 58708 : +
To GenomeBrowser scaffold1790.1:33706..58708
Genes list of scaffold scaffold1790.1
Synonym pfu_aug1.0_5369.1_52523

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1790.1_01833.t1 gi|260808045|ref|XP_002598818.1| hypothetical protein BRAFLDRAFT_74505 [Branchiostoma floridae] 0.0
pfu_aug2.0_1790.1_01833.t1 gi|260808029|ref|XP_002598810.1| hypothetical protein BRAFLDRAFT_74513 [Branchiostoma floridae] 0.0

Transcript
Transcript IDpfu_aug2.0_1790.1_01833.t1
Definition-
>pfu_aug2.0_1790.1_01833.t1
atgatgaaagtctttttcgttttgatatttgcatcttatcaaatatacccgtcatccactcagatcgatgcaaacaatga
gcccaatggtaccacgaagctgtgttcactccaggttgaaaacctcagaaaggaatttctgatgattttggataaccagg
aacaaaaaattgcaaagctcaaggacgatctttataaactgacggacgaaggtattcatatgacaggatcagggactgct
atgaatgtcagtaaaatatacacgagatggggaaagacaacgtgtccagatcatgctaacactgtttactccggatttgt
agggggatcaccatatagtcatagaggaggagccgcagaacccttatgtatgccgaaagaccccgagtggggtatatata
caaatggaagtaagggagatgttgcctatttacatggaactaagtatgggtttcaaacattgaaagactccaggggaaaa
ctaactgataataaagtcccatgtgcagtgtgtaaggtcaacaaaagatcaaccatcatgatgctcccagctcggaagaa
ttgttatggtggttggaacaaagaataccaaggttacctcatggcaggattctggagtcataacagagcatcaaaattta
tttgccttgataaaatcccagataccgttccttatggtaaatcatatcaagaaagttacgtattgaactccgtaaagggt
atatgtggctctctaaactgtccgccgtatgttgaagggagagaactaacctgtgttttggtttatacatttcaaaataa
ctcactcatgttacttttggtgtttttggtcaaatgcaaacttatgagtttacattggaaatttgattatcatgattatg
ttaggaaattgttttcaaaagtaggtaaacacctcaaaatcaaggtcatgaattttattaccgatgaaatagtcaggaca
caggggaaatgcctgtga

Protein
Protein IDpfu_aug2.0_1790.1_01833.t1
Definition-
>pfu_aug2.0_1790.1_01833.t1
MMKVFFVLIFASYQIYPSSTQIDANNEPNGTTKLCSLQVENLRKEFLMILDNQEQKIAKLKDDLYKLTDEGIHMTGSGTA
MNVSKIYTRWGKTTCPDHANTVYSGFVGGSPYSHRGGAAEPLCMPKDPEWGIYTNGSKGDVAYLHGTKYGFQTLKDSRGK
LTDNKVPCAVCKVNKRSTIMMLPARKNCYGGWNKEYQGYLMAGFWSHNRASKFICLDKIPDTVPYGKSYQESYVLNSVKG
ICGSLNCPPYVEGRELTCVLVYTFQNNSLMLLLVFLVKCKLMSLHWKFDYHDYVRKLFSKVGKHLKIKVMNFITDEIVRT
QGKCL

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