Gene
| Gene Model ID | pfu_aug2.0_1791.1_05235 |
|---|---|
| Locus | scaffold1791.1 : 49981 ... 60135 : - |
| To GenomeBrowser | scaffold1791.1:49981..60135 |
| Genes list of scaffold | scaffold1791.1 |
| Synonym | pfu_aug1.0_8941.1_45966 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| non-canonical poly rna polymerase papd5-like | GO:0008152 GO:0016779 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1791.1_05235.t1 | 1 | 1 | NTP_transf_2 | 34 | 128 | 3.8e-13 | 49.5 | 5.4e-17 | 8.1e-13 | 48.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1791.1_05235.t1 | gi|124481633|gb|AAI33102.1| | LOC568678 protein [Danio rerio] | 0.0 |
| pfu_aug2.0_1791.1_05235.t1 | gi|733905858|ref|XP_010716093.1| | PREDICTED: LOW QUALITY PROTEIN: non-canonical poly(A) RNA polymerase PAPD5-like [Meleagris gallopavo] | 0.0 |
| pfu_aug2.0_1791.1_05235.t1 | gi|644995894|ref|XP_008209297.1| | PREDICTED: non-canonical poly(A) RNA polymerase PAPD5-like [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_1791.1_05235.t1 | gi|558153423|ref|XP_006121205.1| | PREDICTED: PAP-associated domain-containing protein 5 isoform X1 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_1791.1_05235.t1 | gi|755944463|ref|XP_011299462.1| | PREDICTED: non-canonical poly(A) RNA polymerase PAPD5-like isoform X2 [Fopius arisanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1791.1_05235.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1791.1_05235.t1 atggactcgcacattctaaggctacacaatgagatcaaagactttgtggcctacatgacaccgacagaagaagagggtaa catgaggaaagaagttgttcagaggattacgtccgtagtcaaagacacgtggcctgatgcaagagttgaaatctttggaa gttttaaaactgggctttatcttcccacaagtgacattgacttggttgtatttggagattgggatgccctacccttgttc acactggagaaggcgttgttggaccgaggttacgcagatcgaagtaccatcaaagtattagacaaagcctcggtaccaat tgttaaaatggttgatcagcagacagaggtgaaagtggacattagttttaacaccaagatgtcggtagagagtgcagctc ttatacagaagtttatggagcagtacccgacgctacaatacttagtcttagtcctcaaacagtttctactacaacgtgat ctcaacgaagtgttcaccggaggaattagctcctacagtctcatctatatggcaattagcttcctacaactcccaaaagg taatgacatcgggagaagttcttatggagcaatgcaggtcaagcaggctttcgagtatgcatacttagtattgagttact cagtatttccgcaatatagtccaaaaatgcacagtatactgggtcgtattgttagagtgacaaacgaagtggtagattac agacgatggatcagagatacatatccctccaaagtcatagacaacctggagcccaaacagagaagttacgcaagtgtggc aaatagtcccaagaaaaacaaactttctccgtcaaagaaagacgcggaaagagagagtgatcattcagattctagctccg tctccatgtacaaatcttcctctagttcagcaagcagtgtttctacatctagtctcagtagtgattcggaatcagaacct gacccaaatcagcagccgctggagcagccagggcaaacaacgccagtcaaagaacagcccattaaatcaaatacatcaag tgatccgtgtcggactaacccaccggcgagtactccttccaaatctcctaaacaatccaccatccagacttacgagtttg tacgcagcagagacttcagtaagcaaagaggatcggctaaaagtcgtgatggcagctctagtagtgtatcatctaataga tctactcaaagtgatatgaataatcaaagaccggtctctggccattcgtcacgaggtgcttactatgacaactacaatag gaactcgaattatcacaatgaccaaacgtcacggaacaaaaactatcatggaaatagtgctaatcatagaggacagaatg cagcccatcagggcggggcacattcaagtaaggtgtacagaccaagcggtaaacgtaggaaaggtagcggaggtggctcg gacaggaactcccaggactatagtggagggtataaaggtaaagacaaggcacagaaccacacctcaaacaggtga |
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Protein
| Protein ID | pfu_aug2.0_1791.1_05235.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1791.1_05235.t1 MDSHILRLHNEIKDFVAYMTPTEEEGNMRKEVVQRITSVVKDTWPDARVEIFGSFKTGLYLPTSDIDLVVFGDWDALPLF TLEKALLDRGYADRSTIKVLDKASVPIVKMVDQQTEVKVDISFNTKMSVESAALIQKFMEQYPTLQYLVLVLKQFLLQRD LNEVFTGGISSYSLIYMAISFLQLPKGNDIGRSSYGAMQVKQAFEYAYLVLSYSVFPQYSPKMHSILGRIVRVTNEVVDY RRWIRDTYPSKVIDNLEPKQRSYASVANSPKKNKLSPSKKDAERESDHSDSSSVSMYKSSSSSASSVSTSSLSSDSESEP DPNQQPLEQPGQTTPVKEQPIKSNTSSDPCRTNPPASTPSKSPKQSTIQTYEFVRSRDFSKQRGSAKSRDGSSSSVSSNR STQSDMNNQRPVSGHSSRGAYYDNYNRNSNYHNDQTSRNKNYHGNSANHRGQNAAHQGGAHSSKVYRPSGKRRKGSGGGS DRNSQDYSGGYKGKDKAQNHTSNR |
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