Gene
| Gene Model ID | pfu_aug2.0_1791.1_05237 |
|---|---|
| Locus | scaffold1791.1 : 74496 ... 80757 : + |
| To GenomeBrowser | scaffold1791.1:74496..80757 |
| Genes list of scaffold | scaffold1791.1 |
| Synonym | pfu_aug1.0_45061.1_05319 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mgc82624 protein | GO:0007219 GO:0008417 GO:0008446 GO:0010842 GO:0019673 GO:0021564 GO:0021744 GO:0042351 GO:0070401 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1791.1_05237.t1 | 1 | 1 | Epimerase | 12 | 52 | 9.4e-08 | 31.7 | 3.5e-11 | 1.0e-07 | 31.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1791.1_05237.t1 | gi|33284866|emb|CAE17600.1| | novel protein similar to bacterial GDP-mannose 4,6-dehydratases [Danio rerio] | 3.0e-28 |
| pfu_aug2.0_1791.1_05237.t1 | gi|328790131|ref|XP_395164.3| | PREDICTED: GDP-mannose 4,6 dehydratase-like isoform X3 [Apis mellifera] | 1.0e-27 |
| pfu_aug2.0_1791.1_05237.t1 | gi|572303536|ref|XP_006617753.1| | PREDICTED: GDP-mannose 4,6 dehydratase-like isoform X1 [Apis dorsata] | 1.0e-27 |
| pfu_aug2.0_1791.1_05237.t1 | gi|571541154|ref|XP_006569515.1| | PREDICTED: GDP-mannose 4,6 dehydratase-like isoform X1 [Apis mellifera] | 1.0e-27 |
| pfu_aug2.0_1791.1_05237.t1 | gi|32766693|gb|AAH55239.1| | GDP-mannose 4,6-dehydratase [Danio rerio] | 1.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_1791.1_05237.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1791.1_05237.t1 atggcgacgagcactgccacgaaaaggaaggttgccttaattacaggcataacgggtcaggatgggtcttacctagctga attcctgatagccaaaggatatgaggtccatggaattatcagaagatcgagcacctttaacacgtcacgtatagaacatc tgtacgaggatcctaaggctcatacggaaggatctcgccagatggatttttcaactgtaggaaagggcagtaagggtcac agcttaaacaaaatgcttcattcgtag |
|
Protein
| Protein ID | pfu_aug2.0_1791.1_05237.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1791.1_05237.t1 MATSTATKRKVALITGITGQDGSYLAEFLIAKGYEVHGIIRRSSTFNTSRIEHLYEDPKAHTEGSRQMDFSTVGKGSKGH SLNKMLHS |
|