Gene
| Gene Model ID | pfu_aug2.0_1791.1_05238 |
|---|---|
| Locus | scaffold1791.1 : 82146 ... 89688 : + |
| To GenomeBrowser | scaffold1791.1:82146..89688 |
| Genes list of scaffold | scaffold1791.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gdp-mannose dehydratase-like | GO:0008446 GO:0019673 GO:0050662 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1791.1_05238.t1 | 1 | 1 | Epimerase | 2 | 159 | 0.0 | 162.7 | 0.0 | 0.0 | 162.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1791.1_05238.t1 | gi|676456197|ref|XP_009054248.1| | hypothetical protein LOTGIDRAFT_215196 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1791.1_05238.t1 | gi|675872636|ref|XP_009021878.1| | hypothetical protein HELRODRAFT_101345 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_1791.1_05238.t1 | gi|524890813|ref|XP_005101948.1| | PREDICTED: GDP-mannose 4,6 dehydratase-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1791.1_05238.t1 | gi|585713368|ref|XP_002741569.2| | PREDICTED: GDP-mannose 4,6 dehydratase-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1791.1_05238.t1 | gi|242019803|ref|XP_002430348.1| | GDP mannose-4,6-dehydratase, putative [Pediculus humanus corporis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1791.1_05238.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1791.1_05238.t1 atggtatcattcgagttagctgagtatacggccaatgttgacgccgtcgggacgcttcgtctccttgatgccattagaac gacgggtcttacagatcaagtgcgtttctaccaggcgtcaaccagcgaaatgttcggcaaagttcaggagattcctcaaa aagagaccacacccttctaccccagatctccgtacggagttgccaagttatatgcttactggatagttataaattacaga gaagcctatgatatgtttgcttgtaatggtatattgttcaaccacgaaagtccacgcagaggtgagacatttgtgacgcg aaagatcacgcgtgcagtagccaaaataactctaggtcaacagaatgttttacagcttggtaaccttgatgctaagagag attggggtcatgccaaggactatgtagaggccatgtggatgatgctccaacacgacaaaccggaggattttgtgatatct accaacgaaactcacagtgtacgggaattcgtggaaaagtctttcaaagttgtcaacgtcgatatagtatgggaagggga gggagtaaacgaggtcggcaaggacaaggccacgggtatcgtcagggtcaaggtcaatccaaaattctacagacccactg aagtgtgctaa |
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Protein
| Protein ID | pfu_aug2.0_1791.1_05238.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1791.1_05238.t1 MVSFELAEYTANVDAVGTLRLLDAIRTTGLTDQVRFYQASTSEMFGKVQEIPQKETTPFYPRSPYGVAKLYAYWIVINYR EAYDMFACNGILFNHESPRRGETFVTRKITRAVAKITLGQQNVLQLGNLDAKRDWGHAKDYVEAMWMMLQHDKPEDFVIS TNETHSVREFVEKSFKVVNVDIVWEGEGVNEVGKDKATGIVRVKVNPKFYRPTEVC |
|