Gene
| Gene Model ID | pfu_aug2.0_1802.1_08581 |
|---|---|
| Locus | scaffold1802.1 : 70427 ... 99985 : - |
| To GenomeBrowser | scaffold1802.1:70427..99985 |
| Genes list of scaffold | scaffold1802.1 |
| Synonym | pfu_aug1.0_10833.1_10215 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transient receptor potential cation channel subfamily m member 5 | GO:0005216 GO:0006812 GO:0034220 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1802.1_08581.t1 | 2 | 1 | Ion_trans | 113 | 209 | 8.3e-11 | 41.5 | 3.0 | 15000.0 | -5.7 |
| pfu_aug2.0_1802.1_08581.t1 | 2 | 2 | Ion_trans | 378 | 569 | 8.3e-11 | 41.5 | 1.7e-14 | 8.3e-11 | 41.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1802.1_08581.t1 | gi|260794336|ref|XP_002592165.1| | hypothetical protein BRAFLDRAFT_88112 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1802.1_08581.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1802.1_08581.t1 atggcagggcgccagttagtactagctcccattttgccaggactgttgatattaagatacaaaggaaagataactccagt tcttcatgagacggagcaaattcatcatgaaatgatcaactctagtgccagtacaggagtgatgccttccctcacagaca cagccaatgaacccatgttgaaatactcaaagagtggaaaaatccaaattgtggagaggagtactagccagactgaagaa gagaagagatcctgttggcagtcttgtaaaaccttctgtctgttccagagagtcaaagatttctacaccgctcctataat ggtgtttgctcacaacatgatatcctacttactgttcctgcttctgttcagttacatgctgctgatagaattcaggaaag aactctcctatgtggagatttcactttacatatgggtgttcaccttaatgattgaagaatttgcacagaatcccataccc acggccttgcttggttatggacttctcagagcaataggaaaacaagcttttgaccctgaatataaaaacaggcttttatc gtatgccaattcctatacattgcatttctgtttaacctgctgcttctccattactaataagttagtattagctcccattt tgccaggactgttgatattacgatacaaaggaaagataactccagttcttaaggagacggaacaaaatcatcatgaaatg atcaactctagtgccagtacaggagtgatgccttccctcacagacacagccaatgaacccatgttgaaatactcaaagag tggaaaaatccaaattgtggagaggagtgcaagccagactgaagaagagaagagatcctgttggcagtcctgtaaaacct tttgtctgttccagagagtcacagatttctacaccgctcctataatggtgtttgctcacaacatgatatcctacttactg ttcttgcttctgttcagttacatgctgctgatagaattcaggaaagaactctcctatgtggagatttcactttacatatg ggtgttcaccttaatgattgaagaatttgcacagctgaaaacagggcgtaatgtacaggtgcatcatttagagcgctgga ctttttctctgttatggtacaggcacattaagccatctgtgaagtactatttggacagtgcttggaatagaatagatgtc ctaactatagttctatttatatgtgccgtaatactgaggttcttaccgtatgacgagactgtagaggcggcaaggattgt gtacggagtgacgttactggtcttcttcttccgacttctcaggattttctccgtcaatcaggaaatgggaccgaagctag aaatgatcaaaagaatgatgatagatctgacctactttatcgtgatattgatggtgtttgtggtatcctatgccattact gcctattctatactgtaccctaactctgtgttggacggagatctgtttgtgaaggtgatgagactgggatactggaatat atatggagaactgtttctggaggaattagaaatcgaggagcctgactgttcatttgatcctgccatatataagaacggca ccctacctcgatgtccggagaaacaccaacaaatcttcaccacgacactcatgggaatgtacatactcatctcgaatgtc ctactgctcaatatactgatagcaatgtttggaaacacttttcagaaggtacagtcagacactaacctatactggtatta ccagcgttacggcctgatcagggaattctacgaacgatccatattacctccaccgttatctatctttgttcacgtcatta acgtcatcaagtggatctgtaggaagtgttgctgtaggaaagcaacattggaggctgatactgctctcaataagcgccta acggaggctcaggataaacagttatctcaatgggaggccatcatggcggaggtgtacatgtataacaaggcctcggagga acgtaattcttctgataacagagttatctctctttctgaaagaatggatgaaatggatgcaaagattgatgaactgtcac aaacacagaatcagatgaggaaacccatagagagactagaggaaaaggaatactataaaactgatatcttttcgaaagat gacataatcatatttttagagaaaaccaggaaaacagggtgctctgaaattagtgaacaggacactggccgggacgaaaa agtctggagagctaatgccataccctcggcgtcgtcgttgtcgtcatccgtagacaaaactttaacctgggctatatctc ttgaactataa |
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Protein
| Protein ID | pfu_aug2.0_1802.1_08581.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1802.1_08581.t1 MAGRQLVLAPILPGLLILRYKGKITPVLHETEQIHHEMINSSASTGVMPSLTDTANEPMLKYSKSGKIQIVERSTSQTEE EKRSCWQSCKTFCLFQRVKDFYTAPIMVFAHNMISYLLFLLLFSYMLLIEFRKELSYVEISLYIWVFTLMIEEFAQNPIP TALLGYGLLRAIGKQAFDPEYKNRLLSYANSYTLHFCLTCCFSITNKLVLAPILPGLLILRYKGKITPVLKETEQNHHEM INSSASTGVMPSLTDTANEPMLKYSKSGKIQIVERSASQTEEEKRSCWQSCKTFCLFQRVTDFYTAPIMVFAHNMISYLL FLLLFSYMLLIEFRKELSYVEISLYIWVFTLMIEEFAQLKTGRNVQVHHLERWTFSLLWYRHIKPSVKYYLDSAWNRIDV LTIVLFICAVILRFLPYDETVEAARIVYGVTLLVFFFRLLRIFSVNQEMGPKLEMIKRMMIDLTYFIVILMVFVVSYAIT AYSILYPNSVLDGDLFVKVMRLGYWNIYGELFLEELEIEEPDCSFDPAIYKNGTLPRCPEKHQQIFTTTLMGMYILISNV LLLNILIAMFGNTFQKVQSDTNLYWYYQRYGLIREFYERSILPPPLSIFVHVINVIKWICRKCCCRKATLEADTALNKRL TEAQDKQLSQWEAIMAEVYMYNKASEERNSSDNRVISLSERMDEMDAKIDELSQTQNQMRKPIERLEEKEYYKTDIFSKD DIIIFLEKTRKTGCSEISEQDTGRDEKVWRANAIPSASSLSSSVDKTLTWAISLEL |
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