Gene
| Gene Model ID | pfu_aug2.0_18065.1_19915 |
|---|---|
| Locus | scaffold18065.1 : 1 ... 1688 : - |
| To GenomeBrowser | scaffold18065.1:1..1688 |
| Genes list of scaffold | scaffold18065.1 |
| Synonym | pfu_aug1.0_120090.1_21080 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vasa-like protein | GO:0003676 GO:0004386 GO:0005524 GO:0005634 GO:0007141 GO:0007275 GO:0007283 GO:0008270 GO:0010467 GO:0030317 GO:0032880 GO:0033391 GO:0034587 GO:0048471 GO:0071546 GO:0071547 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_18065.1_19915.t1 | 1 | 1 | DEAD | 3 | 57 | 1.1e-12 | 47.8 | 9.4e-17 | 1.4e-12 | 47.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_18065.1_19915.t1 | gi|40891625|gb|AAR37337.1| | 0.0 | |
| pfu_aug2.0_18065.1_19915.t1 | gi|524917682|ref|XP_005113588.1| | PREDICTED: probable ATP-dependent RNA helicase DDX4-like, partial [Aplysia californica] | 9.94922e-44 |
| pfu_aug2.0_18065.1_19915.t1 | gi|676467187|ref|XP_009057808.1| | hypothetical protein LOTGIDRAFT_72314, partial [Lottia gigantea] | 9.00054e-42 |
| pfu_aug2.0_18065.1_19915.t1 | gi|156400942|ref|XP_001639051.1| | predicted protein [Nematostella vectensis] | 1.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_18065.1_19915.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_18065.1_19915.t1 ataagcttggaaaagatcaagtatctgatcctagatgaagcagacagaatgctcgacatgggatttggtccagaaattaa gaagattgtgactgagatgggaatgccgtcaaagacagacagacagaccctgatgttcagtgctaccttccccaaggaag tacaggagatagctgcggagtacctgaaccactacctgttcctcactgtagggagggtaggtggggcatgtactgatgtc acacagactgtgtttgaggtagacagacaggaaaaaagacagagactctcagatatactcacagaatcag |
|
Protein
| Protein ID | pfu_aug2.0_18065.1_19915.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_18065.1_19915.t1 ISLEKIKYLILDEADRMLDMGFGPEIKKIVTEMGMPSKTDRQTLMFSATFPKEVQEIAAEYLNHYLFLTVGRVGGACTDV TQTVFEVDRQEKRQRLSDILTES |
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