Gene
| Gene Model ID | pfu_aug2.0_181.1_03756 |
|---|---|
| Locus | scaffold181.1 : 60545 ... 75665 : - |
| To GenomeBrowser | scaffold181.1:60545..75665 |
| Genes list of scaffold | scaffold181.1 |
| Synonym | pfu_aug1.0_5565.1_67280 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calmodulin | GO:0000922 GO:0004683 GO:0005509 GO:0005513 GO:0005516 GO:0005524 GO:0005654 GO:0005814 GO:0005829 GO:0005875 GO:0005954 GO:0006468 GO:0006898 GO:0007099 GO:0007268 GO:0007605 GO:0007608 GO:0007616 GO:0008049 GO:0008582 GO:0009792 GO:0016028 GO:0016060 GO:0016061 GO:0016062 GO:0016477 GO:0030048 GO:0030424 GO:0030425 GO:0030496 GO:0031475 GO:0031476 GO:0031489 GO:0031965 GO:0035071 GO:0042052 GO:0042981 GO:0043277 GO:0045211 GO:0046331 GO:0046716 GO:0048786 GO:0051296 GO:0051383 GO:0051489 GO:0051533 GO:0051726 GO:0060278 GO:0070855 GO:0072499 GO:0072686 GO:0090307 GO:2001020 GO:2001259 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_181.1_03756.t1 | 2 | 1 | EF-hand_4 | 10 | 25 | 9.9e-07 | 28.4 | 0.037 | 50.0 | 3.7 |
| pfu_aug2.0_181.1_03756.t1 | 3 | 1 | EF-hand_6 | 12 | 27 | 1.1e-17 | 62.2 | 0.0017 | 2.3 | 8.3 |
| pfu_aug2.0_181.1_03756.t1 | 3 | 1 | EF-hand_5 | 12 | 25 | 6.0e-17 | 60.1 | 0.0016 | 2.2 | 7.7 |
| pfu_aug2.0_181.1_03756.t1 | 3 | 1 | EF-hand_1 | 12 | 27 | 2.1e-27 | 92.2 | 4.0e-06 | 0.0054 | 15.9 |
| pfu_aug2.0_181.1_03756.t1 | 2 | 1 | EF-hand_7 | 12 | 25 | 9.2e-24 | 83.3 | 0.0019 | 2.6 | 8.2 |
| pfu_aug2.0_181.1_03756.t1 | 2 | 1 | EF-hand_8 | 13 | 54 | 7.1e-24 | 83.1 | 4.0e-09 | 5.4e-06 | 25.9 |
| pfu_aug2.0_181.1_03756.t1 | 3 | 2 | EF-hand_6 | 37 | 66 | 1.1e-17 | 62.2 | 5.1e-13 | 6.9e-10 | 37.9 |
| pfu_aug2.0_181.1_03756.t1 | 3 | 2 | EF-hand_1 | 37 | 65 | 2.1e-27 | 92.2 | 1.7e-13 | 2.2e-10 | 39.0 |
| pfu_aug2.0_181.1_03756.t1 | 2 | 2 | EF-hand_7 | 38 | 98 | 9.2e-24 | 83.3 | 4.9e-24 | 6.6e-21 | 74.2 |
| pfu_aug2.0_181.1_03756.t1 | 3 | 2 | EF-hand_5 | 38 | 62 | 6.0e-17 | 60.1 | 7.4e-11 | 1.0e-07 | 30.9 |
| pfu_aug2.0_181.1_03756.t1 | 2 | 2 | EF-hand_4 | 42 | 99 | 9.9e-07 | 28.4 | 3.1e-08 | 4.1e-05 | 23.2 |
| pfu_aug2.0_181.1_03756.t1 | 2 | 2 | EF-hand_8 | 50 | 100 | 7.1e-24 | 83.1 | 1.1e-20 | 1.4e-17 | 62.9 |
| pfu_aug2.0_181.1_03756.t1 | 3 | 3 | EF-hand_1 | 73 | 100 | 2.1e-27 | 92.2 | 1.0e-12 | 1.4e-09 | 36.5 |
| pfu_aug2.0_181.1_03756.t1 | 3 | 3 | EF-hand_5 | 77 | 96 | 6.0e-17 | 60.1 | 8.9e-07 | 0.0012 | 18.0 |
| pfu_aug2.0_181.1_03756.t1 | 3 | 3 | EF-hand_6 | 79 | 99 | 1.1e-17 | 62.2 | 4.3e-05 | 0.058 | 13.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_181.1_03756.t1 | gi|524888723|ref|XP_005100927.1| | PREDICTED: calmodulin-like, partial [Aplysia californica] | 0.0 |
| pfu_aug2.0_181.1_03756.t1 | gi|17564542|ref|NP_503386.1| | CMD-1 [Caenorhabditis elegans] | 0.0 |
| pfu_aug2.0_181.1_03756.t1 | gi|698426281|ref|XP_009696404.1| | PREDICTED: calmodulin-like, partial [Cariama cristata] | 0.0 |
| pfu_aug2.0_181.1_03756.t1 | gi|195381281|ref|XP_002049382.1| | GJ20779 [Drosophila virilis] | 0.0 |
| pfu_aug2.0_181.1_03756.t1 | gi|700389780|ref|XP_009935167.1| | PREDICTED: calmodulin [Opisthocomus hoazin] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_181.1_03756.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_181.1_03756.t1 atggcagatagtctatctgaggaacagattgctgggaacggaacgatagactttccagaatttttaactatgatgtcaag gaaaatgaaagacacagactccgaggaagaacttcgggaagccttcagagttttcgataaagacggaaacgggtttataa gtgctgctgaattacgtcacgtgatgacgaatcttggggaaaaactgacggacgaggaggtcgatgaaatgatcagggaa gcggatattgacggcgacggacaagtcaattacgaagaatttgtaggaatgatgcaaacaaagtaa |
|
Protein
| Protein ID | pfu_aug2.0_181.1_03756.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_181.1_03756.t1 MADSLSEEQIAGNGTIDFPEFLTMMSRKMKDTDSEEELREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE ADIDGDGQVNYEEFVGMMQTK |
|